Brachybacterium netajii


Citation

Formal styling
Brachybacterium netajii Alam et al., 2026
Effective publication
Alam et al., 2026
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:_zufbysb (validated)
Canonical URL
https://seqco.de/i:56045

Nomenclature

Rank
Species
Syllabication
ne.ta'ji.i
Etymology
N.L. gen. n. netajii, of Netaji, the Hindi/Bengali honorific title (meaning "respected leader") by which Subhas Chandra Bose, Indian nationalist (1897–1945), is widely known
Nomenclatural type
Genome sc|0005796 Ts
Reference strain
Strain sc|0042022: MTCC 13125 = DNPG3 Lookup StrainInfo
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Cells are Gram-positive and non-motile. Colonies formed on PNP agar are yellowish-white and circular. Growth occurs over a temperature range of 20–40°C, with optimal growth observed at 30 °C. The strain tolerates up to 9% NaCl and grows well within a pH range of 5.8–8.0. The strain is oxidase-negative but catalase-positive and exhibits starch-hydrolyzing activity. Positive reactions was observed for β-glucosidase activity. The organism is capable of utilizing sucrose, D-xylose, D-glucose, D-mannose, L-arabinose, D-melibiose, D-maltose, D-trehalose, D-cellobiose, D-sorbitol, and D-mannitol as carbon sources. Positive reactions are recorded for adenosine assimilation, L-lactate utilization, and citrulline metabolism. In contrast, the strain tested negative for Ala-Phe-Pro arylamidase, glycine arylamidase, pyrrolidonyl arylamidase, proline arylamidase, β-alanine arylamidase, and Gly-Gly arylamidase. H2S production was not detected. Furthermore, the strain lacked enzymatic activities associated with β-N-acetylglucosaminidase, lipase, phosphatase, β-glucuronidase, α-galactosidase, α-glucosidase, β-galactosidase, and β-xylosidase. The strain failed to utilize D-tagatose, 5-keto-D-gluconate, succinate, palatinose, N-acetyl-D-glucosamine, L-malate, L-arabinitol, and L-lactate as substrates.
The cellular fatty acid profile is dominated by C15:0 Anteiso (24.61%) as the most abundant, followed by C₁₁:₀ (21.06%), iso-C₁₆:₀ (11.89%), C₁₆:₀ (11.58%), and anteiso-C₁₇:₀ (11.24%). The predominant respiratory quinone is menaquinone MK-7, consistent with members of the genus Brachybacterium. The reference strain, designated DNPG3 (= MTCC 13125), was isolated from the River Ganges, W.B, India.
Classification
Bacteria » Actinomycetota » Actinomycetes » Micrococcales » Dermabacteraceae » Brachybacterium » Brachybacterium netajii
Parent
Brachybacterium

Genomics

Accession
NCBI Assembly: GCA_054114245.1 [NCBI | EMBL]
Cultures
Strain sc|0042022
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 99.99%
  • Contamination: 0.05%
  • Quality: 99.74
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 88.0%)
  • tRNAs for 20 amino acids
Sequencing depth
170.5 ×
Source
Other features
  • G+C Content: 72.5%
  • Coding Density: 89.53%
  • Codon Table: 11
  • N50: 463,047 bp
  • Contigs: 23
  • Largest Contig: 876,926 bp
  • Assembly Length: 3,706,087 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Genome completeness was assessed using checkM2. The strain DNPG3 exhibited the ability to degrade para nitrophenol catabolically. 
Automated checks
Complete

Last modified about 1 month ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
4 months ago and claimed 4 months ago by Alam, Sk Aftabul
Submitted
4 months ago by Alam, Sk Aftabul
Curators
Endorsed
4 months ago by St. John, Emily
Validated
About 1 month ago by Rodriguez-R, Luis M
Date of priority
2026-07-26 05:50 AM (UTC)

Publications
1

Citation Title
Alam et al., 2026, Scientific Reports Polyphasic taxonomic characterization of Brachybacterium netajii sp. nov., a metabolically versatile bacterium isolated from the river Ganges, India
Effective publication



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