Brachybacterium netajii


This name contravenes at least one rule from the SeqCode, and it's at risk of being rejected:
  • Unavailable reference strain: If isolated, reference strains should be submitted to a public culture collection

Citation

Formal styling
Brachybacterium netajii Alam et al., 2026
Effective publication
Alam et al., 2026
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:_zufbysb (validated)
Canonical URL
https://seqco.de/i:56045

Nomenclature

Rank
Species
Syllabication
ne.ta'ji.i
Etymology
N.L. gen. n. netajii, of Netaji, the Hindi/Bengali honorific title (meaning "respected leader") by which Subhas Chandra Bose, Indian nationalist (1897–1945), is widely known
Nomenclatural type
NCBI Assembly: GCA_054114245.1
Reference strain
Strain sc|0042022: MTCC 13125 = DNPG3 Lookup StrainInfo
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Cells are Gram-positive and non-motile. Colonies formed on PNP agar are yellowish-white and circular. Growth occurs over a temperature range of 20–40°C, with optimal growth observed at 30 °C. The strain tolerates up to 9% NaCl and grows well within a pH range of 5.8–8.0. The strain is oxidase-negative but catalase-positive and exhibits starch-hydrolyzing activity. Positive reactions was observed for β-glucosidase activity. The organism is capable of utilizing sucrose, D-xylose, D-glucose, D-mannose, L-arabinose, D-melibiose, D-maltose, D-trehalose, D-cellobiose, D-sorbitol, and D-mannitol as carbon sources. Positive reactions are recorded for adenosine assimilation, L-lactate utilization, and citrulline metabolism. In contrast, the strain tested negative for Ala-Phe-Pro arylamidase, glycine arylamidase, pyrrolidonyl arylamidase, proline arylamidase, β-alanine arylamidase, and Gly-Gly arylamidase. H2S production was not detected. Furthermore, the strain lacked enzymatic activities associated with β-N-acetylglucosaminidase, lipase, phosphatase, β-glucuronidase, α-galactosidase, α-glucosidase, β-galactosidase, and β-xylosidase. The strain failed to utilize D-tagatose, 5-keto-D-gluconate, succinate, palatinose, N-acetyl-D-glucosamine, L-malate, L-arabinitol, and L-lactate as substrates.
The cellular fatty acid profile is dominated by C15:0 Anteiso (24.61%) as the most abundant, followed by C₁₁:₀ (21.06%), iso-C₁₆:₀ (11.89%), C₁₆:₀ (11.58%), and anteiso-C₁₇:₀ (11.24%). The predominant respiratory quinone is menaquinone MK-7, consistent with members of the genus Brachybacterium. The reference strain, designated DNPG3 (= MTCC 13125), was isolated from the River Ganges, W.B, India.
Classification
Bacteria » Actinomycetota » Actinomycetes » Micrococcales » Dermabacteraceae » Brachybacterium » Brachybacterium netajii
Parent
Brachybacterium

Genomics

Accession
NCBI Assembly:GCA_054114245.1
Cultures
Strain sc|0042022
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 99.99%
  • Contamination: 0.05%
  • Quality: 99.74
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 88.0%)
  • tRNAs for 20 amino acids
Sequencing depth
170.5 ×
Source
Other features
  • G+C Content: 72.5%
  • Coding Density: 89.53%
  • Codon Table: 11
  • N50: 463,047 bp
  • Contigs: 23
  • Largest Contig: 876,926 bp
  • Assembly Length: 3,706,087 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Genome completeness was assessed using checkM2. The strain DNPG3 exhibited the ability to degrade para nitrophenol catabolically. 
Automated checks
Complete

Last modified 17 days ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
4 months ago and claimed 4 months ago by Alam, Sk Aftabul
Submitted
4 months ago by Alam, Sk Aftabul
Curators
Endorsed
4 months ago by St. John, Emily
Validated
17 days ago by Rodriguez-R, Luis M
Date of priority
2026-07-26 05:50 AM (UTC)

Publications
1

Citation Title
Alam et al., 2026, Scientific Reports Polyphasic taxonomic characterization of Brachybacterium netajii sp. nov., a metabolically versatile bacterium isolated from the river Ganges, India
Effective publication



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