Neomicrothrix subdominans


Citation

Formal styling
Neomicrothrix subdominans corrig. Nierychlo et al., 2021 (priority 2026)
Effective publication
Nierychlo et al., 2021
Corrigendum
Oren, 2022 from “Microthrix subdominans” (sic)
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:eg6x77q2 (validated)
Canonical URL
https://seqco.de/i:609

Nomenclature

Rank
Species
Syllabication
sub.do'mi.nans.
Etymology
L. prep. sub, below; L. pres. part. dominans, dominant; N.L. fem. part. adj. subdominans, indicating the abundance of this organism often below the dominant species Neomicrothrix parvicella
Nomenclatural type
NCBI Assembly: GCA_016719385.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Filamentous bacteria commonly found in municipal activated sludge WWTPs. The species was defined based on phylogenomic and 16S rRNA-based phylogenetic analysis. The filaments are 1.0 ± 0.2 µm wide and 98 ± 19 µm long. Its is a heterotroph and has a potential to reduce nitrate to nitrite. Based on metabolic potential they could consume long chain fatty acids and can accumulate and store lipids under both aerobic and anaerobic conditions. In situ analysis showed that they are able to store poly-P, but to not cycle it. 
Classification
Bacteria » Actinomycetota » Acidimicrobiia » Acidimicrobiales » “Neomicrotrichaceae” » Neomicrothrix » Neomicrothrix subdominans
Parent
Neomicrothrix
Alternative placements
Pseudonyms
  • Microthrix subdominans (Original, corrected name)

Genomics

Accession
NCBI Assembly:GCA_016719385.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 93.16%
  • Contamination: 0.85%
  • Quality: 88.91
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Sequencing depth
23.2 ×
Source
Other features
  • G+C Content: 67.97%
  • Coding Density: 88.91%
  • Codon Table: 11
  • N50: 911,658 bp
  • Contigs: 11
  • Largest Contig: 1,245,818 bp
  • Assembly Length: 4,214,851 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
The quality was assessed using CheckM
Automated checks
Complete

Last modified 16 days ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
Almost 2 years ago by Nielsen, Per Halkjær
Submitted
21 days ago by Nielsen, Per Halkjær
Curators
Validated
7 days ago by Rodriguez-R, Luis M
Date of priority
2026-01-29 10:06 AM (UTC)

Publications
2

Citation Title
Oren, 2022, International Journal of Systematic and Evolutionary Microbiology Candidatus List No. 4: Lists of names of prokaryotic Candidatus taxa
Corrigendum
Nierychlo et al., 2021, Frontiers in Microbiology Low Global Diversity of Candidatus Microthrix, a Troublesome Filamentous Organism in Full-Scale WWTPs
Effective publication



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seqco.de/r:eg6x77q2