| Reported in | Status | Registered by | ||
|---|---|---|---|---|
| Flavobacterium lacunae | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium lacicola | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium kyungheense | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium koreense | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium knui | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium kingsejongi | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium keumense | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium jumunjinense | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium johnsoniae subsp. johnsoniae | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium johnsoniae | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium johnsoniae subsp. aurantiacum | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium jejuense | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium inkyongense | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium indicum | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium ichthyis | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium hydrophilum | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium hydatis | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium humicola | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium hiemivividum | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium hibisci | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium hibernum | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium hercynium | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium hauense | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium haoranii | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium hankyongi | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium gyeonganense | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium granuli | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium gossypii | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium glycines | Unknown | Valid (ICNP) | Excubia bot over 4 years ago | |
| Flavobacterium glaciei | Unknown | Valid (ICNP) | Excubia bot over 4 years ago |