SeqCode Registry
Register List https://seqco.de/r:eh4rag03 [2025]

Fontibacterium commune gen. nov. sp. nov.

Submitted by Thrash, Cameron

Genus Fontibacterium

Etymology
[Fon.ti.bac.te'ri.um] L. masc. n. fons, a spring; N.L. neut. n. bacterium, a rod, bacterium; N.L. neut. n. Fontibacterium, a bacterium from a spring
Nomenclatural type
Species Fontibacterium communeTs
Description
Aerobic, chemoorganoheterotrophic, and oligotrophic. Cells are small, curved rods roughly 1 × 0.1 µm. Non-motile. On the basis of phylogenomics and 16S rRNA gene phylogenetics, subclade IIIb/LD12 occurs on a separate branch within the Pelagibacteraceae (SAR11), sister to subclade IIIa containing strains HIMB114 and IMCC9063. Owing to the depth of branching between these clades using concatenated protein-coding genes, and the 92 and 91% 16S rRNA gene sequence identity with HIMB114 and IMCC9063, respectively, we propose LSUCC0530 and subclade IIIb/LD12 as a novel genus in the Pelagibacteraceae.
Classification
Bacteria » Pseudomonadota » Alphaproteobacteria » Pelagibacterales » Pelagibacteraceae » Fontibacterium
References
Effective publication: Henson et al., 2018 [1]
Emendavit: Tsementzi et al., 2019 [2]
Registry URL
https://seqco.de/i:453

Species Fontibacterium communeTs

Etymology
[com.mu'ne] L. neut. adj. commune, common
Nomenclatural type
NCBI Assembly: GCA_002688585.1 Ts
Reference Strain
Strain sc|0039474: LSUCC0530
Description
In addition to the properties given in the genus description, the species is described as follows. Growth occurs at temperatures between 23 °C and 30 °C, but not at 11 °C or below, nor at 35 °C or above. Optimal salinity is 1.45 and below, and growth occurs between 0.36 and 4.68. At optimal temperature and salinity, cells divide at an average rate of 0.52 day^-1. Genome size is 1.16 Mbp, with 1271 predicted genes, and a GC content of 29.02% (calculated). LSUCC0530 had an ANI of 75.3 and 75.9% and an AAI of 58.1 and 59.7% with HIMB114 and IMCC9063, respectively. The genome is available on GenBank under accession number CP024034.
Classification
Bacteria » Pseudomonadota » Alphaproteobacteria » Pelagibacterales » Pelagibacteraceae » Fontibacterium » Fontibacterium communeTs
References
Effective publication: Henson et al., 2018 [1]
Registry URL
https://seqco.de/i:457

References

  1. Henson et al. (2018). Cultivation and genomics of the first freshwater SAR11 (LD12) isolate. The ISME Journal. DOI:10.1038/s41396-018-0092-2
  2. Tsementzi et al. (2019). Ecogenomic characterization of widespread, closely-related SAR11 clades of the freshwater genus “Candidatus Fonsibacter” and proposal of Ca. Fonsibacter lacus sp. nov. Systematic and Applied Microbiology. DOI:10.1016/j.syapm.2019.03.007

Register List Certificate of Validation

On behalf of the Committee on the Systematics of Prokaryotes Described from Sequence Data (SeqCode Committee), we hereby certify that the Register List seqco.de/r:eh4rag03 submitted by Thrash, Cameron and including 2 new names has been successfully validated.


Date of Priority: 2025-05-14 06:29 UTC
DOI: 10.57973/seqcode.r:eh4rag03