SeqCode Registry
cognitis nomina
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Genomes
sc|0001335
JSON
Genome sc|0001335
Name
Proruminimicrobium quisquiliarum
Ts
Database
NCBI Assembly
Accession
GCA_018433245.1
Genomics
Accession
NCBI Assembly:
GCA_018433245.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
97.75%
Contamination:
1.12%
Quality:
92.15
Ribosomal and transfer RNA genes
2 16S rRNAs (up to 42.0%)
1 23S rRNA (up to 34.0%)
tRNAs for 20 amino acids
Sequencing depth
22.5 ×
Source
BioSample: SAMN16056179
BioSample: SAMN15751392
Other features
G+C Content:
35.1%
Coding Density:
93.97%
Codon Table:
11
N50:
219,880 bp
Contigs:
35
Largest Contig:
433,377 bp
Assembly Length:
1,938,615 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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