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cognitis nomina
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Genomes
sc|0001448
JSON
Genome sc|0001448
Name
Enterococcus clewellii
Database
NCBI Assembly
Accession
GCA_002140975.1
Genomics
Accession
NCBI Assembly:
GCA_002140975.1
Type
Isolate Genome
Estimated Quality Metrics
Completeness:
100.0%
Contamination:
1.9%
Quality:
90.5
Ribosomal and transfer RNA genes
1 16S rRNA (up to 100.0%)
3 23S rRNAs (up to 53.0%)
tRNAs for 20 amino acids
Sequencing depth
70.0 ×
Source
BioSample: SAMN04634087
Other features
G+C Content:
37.92%
Coding Density:
85.87%
Codon Table:
11
N50:
576,736 bp
Contigs:
38
Largest Contig:
1,386,938 bp
Assembly Length:
4,646,638 bp
Ambiguous Assembly Fraction:
4.87%
Automated checks
Complete
Sample Metadata
Date
Collection Date:
2015
Location
Not detected
Toponym
Not detected
Environment
Isolation Source:
intestinal contents
Other
Host:
Insect
Package
Ncbi Submission Package:
Pathogen.cl.1.0
Biosamplemodel:
Pathogen.cl
All retrieved samples
SAMN04634087
: Enterococcus sp. 9E7_DIV0242
Metadata retrieved
10 months ago
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
SAMN04634087
×
strain
9E7_DIV0242
INSDC secondary accession
SRS2253645
NCBI submission package
Pathogen.cl.1.0
organism
Enterococcus sp. 9E7_DIV0242
collection date
2015
isolation source
intestinal contents
host
Insect
BioSampleModel
Pathogen.cl
ENA-FIRST-PUBLIC
2016-04-14
ENA-LAST-UPDATE
2017-06-06
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