Genome sc|0001518

Genomics

Accession

INSDC Nucleotide:CP136752.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 100.0%
• Contamination: 0.0%
• Quality: 100.0

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

2048.0 ×

Source

• BioSample: SAMN37319669
• BioSample: SAMN37217578

Other features

• G+C Content: 34.13%
• Coding Density: 89.11%
• Codon Table: 11
• N50: 1,455,463 bp
• Contigs: 1
• Largest Contig: 1,455,463 bp
• Assembly Length: 1,455,463 bp
• Ambiguous Assembly Fraction: 0.0056%

Automated checks

Complete

Sample Metadata

Date

Collection Date: 2021-08-29

Location

Lat Lon: 22.39 S 40.26 W

Toponym

Geo Loc Name: Brazil: Campos Basin, South Atlantic

Environment

Sample Type: metagenomic assembly

Isolation Source: Sponge tissue

Env Broad Scale: ENVO:00002030

Env Local Scale: ENVO:00000447

Env Medium: ENVO:00010483

Other

Not detected

Package

Ncbi Submission Package: MIMAG.host-associated.6.0

Biosamplemodel: MIMAG.host-associated

All retrieved samples

• SAMN37319669: MIMAG Metagenome-assembled Genome sample from Nitrosopumilaceae archaeon AB1(1)
• SAMN37217578: MIMAG Metagenome-assembled Genome sample from Aphrocallistes beatrix

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Metadata retrieved 5 months ago