Genome sc|0001584

Name

Paraluminiphilus aquimaris^Ts

Database

INSDC Nucleotide

Accession

CP036501.1

Genomics

Accession

INSDC Nucleotide:CP036501.1

Type

Isolate Genome

Estimated Quality Metrics

Completeness: 95.93%
Contamination: 0.44%
Quality: 93.73

Ribosomal and transfer RNA genes

1 16S rRNA (up to 100.0%)
1 23S rRNA (up to 100.0%)
tRNAs for 21 amino acids

Sequencing depth

416.5 ×

Source

BioSample: SAMN10929372

Other features

G+C Content: 52.7%
Coding Density: 91.96%
Codon Table: 11
N50: 2,724,458 bp
Contigs: 1
Largest Contig: 2,724,458 bp
Assembly Length: 2,724,458 bp
Ambiguous Assembly Fraction: 0.0037%

Submitter comments

The Prokaryotic Genome Annotation Pipeline (PGAP) was used to identify tRNA and rRNA genes. Completion and contamination were estimated by CheckM.

Automated checks

Complete

Sample Metadata

Date

Collection Date: 2017-02-23

Location

Lat Lon: 38.23 N 128.67 E

Toponym

Geo Loc Name: South Korea

Environment

Env Broad Scale: mairne coastal biomes

Env Local Scale: surface layer

Env Medium: seawater

Other

Depth: 10 m

Package

Ncbi Submission Package: MIGS.ba.water.6.0

Biosamplemodel: MIGS.ba

All retrieved samples

SAMN10929372: MIGS Cultured Bacterial/Archaeal sample from Candidatus Paraluminiphilus aquimaris

Metadata retrieved 8 months ago

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