Genome sc|0001585

Genomics

Accession

INSDC Nucleotide:SHNP00000000.1

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 99.57%
• Contamination: 0.54%
• Quality: 96.87

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

367.4 ×

Source

• BioSample: SAMN10929368

Other features

• G+C Content: 52.9%
• Coding Density: 91.16%
• Codon Table: 11
• N50: 672,971 bp
• Contigs: 22
• Largest Contig: 1,114,554 bp
• Assembly Length: 4,356,674 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

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Last modified about 1 month ago

Sample Metadata

BioSample entries

• BioSample: SAMN10929368

Date

Collection Date: 2009-04-30

Location

Lat Lon: 38.23 N 128.68 E

Toponym

Geo Loc Name: South Korea

Environment

Env Broad Scale: mairne coastal biomes

Env Local Scale: surface layer

Env Medium: seawater

Other

Depth: 10 m

Package

Ncbi Submission Package: MIGS.ba.water.6.0

Biosamplemodel: MIGS.ba

All retrieved samples

• SAMN10929368: MIGS Cultured Bacterial/Archaeal sample from Candidatus Seongchinamella marina

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Metadata retrieved about 1 month ago