JSON

Genome sc|0001910

Name

“Eutrophobius brisbanensis”

Database

NCBI Assembly

Accession

GCA_038131795.1

Genomics

Accession
NCBI Assembly: GCA_038131795.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 98.24%
  • Contamination: 0.88%
  • Quality: 93.84
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Source
Other features
  • G+C Content: 45.5%
  • Coding Density: 91.15%
  • Codon Table: 11
  • N50: 2,524,515 bp
  • Contigs: 9
  • Largest Contig: 2,524,515 bp
  • Assembly Length: 2,748,242 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completeness and contamination were evaluated using CheckM v 1.1.3
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2020-02-26
Location
Lat Lon: 27.445556 S 153.084444 E
Toponym
Geo Loc Name: Australia:Brisbane
Environment
Sample Type: metagenomic assembly
Isolation Source: estuary
Env Broad Scale: estuarine biome
Env Local Scale: estuary
Env Medium: estuarine water
Other
Depth: 0
Package
Ncbi Submission Package: MIMAG.water.6.0
Biosamplemodel: MIMAG.water
Additional Accessions
SAMN37699808
All retrieved samples
Metadata retrieved 29 days ago


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