JSON

Genome sc|0002949

Name

“Ktedonobacter carboxidivorans”

Database

NCBI Assembly

Accession

GCA_041156125.1

Genomics

Accession
NCBI Assembly:GCA_041156125.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 96.21%
  • Contamination: 3.96%
  • Quality: 76.41
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 0 23S rRNAs
  • tRNAs for 19 amino acids
Source
Other features
  • G+C Content: 53.43%
  • Coding Density: 83.93%
  • Codon Table: 11
  • N50: 119,701 bp
  • Contigs: 88
  • Largest Contig: 341,659 bp
  • Assembly Length: 6,353,594 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Genomic annotation was done by MicroScope, an online tool.
Automated checks
Complete
Last modified 3 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2011-02-13
Location
Lat Lon: 38.57 S 71.78 W
Toponym
Geo Loc Name: Chile: Melipeuco
Environment
Sample Type: metagenomic assembly
Isolation Source: volcanic soil
Env Broad Scale: soil biome
Env Local Scale: volcanic soil 1957_MAG2
Env Medium: volcanic soil 1957_MAG2
Other
Depth: 10 cm
Package
Ncbi Submission Package: MIMAG.6.0
Biosamplemodel: MIMAG
Additional Accessions
SRR12921514
All retrieved samples
Metadata retrieved 3 months ago


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