JSON

Genome sc|0002952

Name

“Nitrososphaera maunauluensis”

Database

NCBI Assembly

Accession

GCA_041156085.1

Genomics

Accession
NCBI Assembly:GCA_041156085.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 97.57%
  • Contamination: 0.0%
  • Quality: 97.57
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Source
Other features
  • G+C Content: 35.54%
  • Coding Density: 72.54%
  • Codon Table: 11
  • N50: 10,533 bp
  • Contigs: 434
  • Largest Contig: 53,170 bp
  • Assembly Length: 2,976,951 bp
  • Ambiguous Assembly Fraction: 0.15%
Submitter comments
Genomic annotation was done by MicroScope, an online tool.
Automated checks
Complete
Last modified 3 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2022-04-25
Location
Lat Lon: 19.33884 N 155.2033492 W
Toponym
Geo Loc Name: USA: Hawaii, Kilauea
Environment
Sample Type: metagenomic assembly
Isolation Source: soil
Env Broad Scale: Soil
Env Local Scale: Soil environment
Env Medium: Soil
Other
Depth: 5 cm
Package
Ncbi Submission Package: MIMAG.6.0
Biosamplemodel: MIMAG
Additional Accessions
SRR28573299
All retrieved samples
Metadata retrieved 3 months ago


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