Genome sc|0003157

Genomics

Accession

INSDC Nucleotide:CP098020

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 90.0%
• Contamination: 0.0%
• Quality: 90.0

Ribosomal and transfer RNA genes

• 2 16S rRNAs (up to 100.0%)
• 2 23S rRNAs (up to 10.0%)
• tRNAs for 17 amino acids

Sequencing depth

62.0 ×

Source

• BioSample: SAMN28659272

Other features

• G+C Content: 57.2%
• Coding Density: 86.64%
• Codon Table: 11
• N50: 2,526,949 bp
• Contigs: 1
• Largest Contig: 2,526,949 bp
• Assembly Length: 2,526,949 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

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Last modified 29 days ago

Sample Metadata

BioSample entries

• BioSample: SAMN28659272

Date

Collection Date: not available

Location

Lat Lon: 5.931 N 73.304 W

Toponym

Geo Loc Name: Colombia:Gambita

Environment

Isolation Source: decomposition metagenome

Env Broad Scale: ENVO:00002261

Env Local Scale: ENVO:00002261

Env Medium: ENVO:00001998

Other

Not detected

Package

Ncbi Submission Package: MIMAG.5.0

Biosamplemodel: MIMAG

Additional Accessions

SAMN28657967, SAMN28657968, SAMN28657969

All retrieved samples

• SAMN28659272: MIMAG Metagenome-assembled Genome sample from Ochrobactrum sp.

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Metadata retrieved about 1 month ago