Pristimantibacillus lignocellulolyticus^Ts

Citation

Formal styling

Pristimantibacillus lignocellulolyticus^Ts Díaz Rodríguez et al., 2022

Effective publication

Díaz Rodríguez et al., 2022

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:xwx6hrsf (validated)

Canonical URL

https://seqco.de/i:23510

Nomenclature

Rank

Species

Syllabication

lig.no.cel.lu.lo.ly'ti.cus

Etymology

N.L. neut. n. lignocellulosum, lignocellulose; N.L. masc. adj. lyticus, (from Gr. masc. adj. lytikos) able to dissolve; N.L. masc. adj. lignocellulolyticus, capable of degrading lignocellulose as part of a lignocellulolytic bacterial consortium

Nomenclatural type

INSDC Nucleotide: CP097899

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

The species is established on the same basis as the genus and the type material is the genome MAG5.

Classification

Bacteria » Bacillota » Bacilli » Caryophanales » Paenibacillaceae » Pristimantibacillus » Pristimantibacillus lignocellulolyticus^Ts

Parent

Pristimantibacillus

Alternative placements

• Pristimantibacillus gtdb

Genomics

Accession

INSDC Nucleotide:CP097899

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 98.0%
• Contamination: 0.7%
• Quality: 94.5

Ribosomal and transfer RNA genes

• 8 16S rRNAs (up to 100.0%)
• 8 23S rRNAs (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

123.0 ×

Source

• BioSample: SAMN28659477

Other features

• G+C Content: 37.8%
• Coding Density: 85.47%
• Codon Table: 11
• N50: 5,268,630 bp
• Contigs: 1
• Largest Contig: 5,268,630 bp
• Assembly Length: 5,268,630 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

See additional details

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Last modified 29 days ago

Metadata

Outside links and data sources

• GTDB Tree: s__Pristimantibacillus lignocellulolyticus
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Pristimantibacillus lignocellulolyticus (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified about 1 month ago
• Submission process status
• Quality checks before valid publication

Registered by

Jimenez, Diego over 2 years ago

Submitted by

Jimenez, Diego over 2 years ago

Curators

• Chuvochina, Maria (nomenclature)
• Palmer, Marike

Endorsed by

Palmer, Marike about 2 years ago

Validated by

Palmer, Marike about 2 years ago

Date of priority

2022-09-29 07:00 AM (UTC)