Genome sc|0003175


Database

NCBI Assembly

Accession

GCA_046044395.1

Genomics

Accession
NCBI Assembly:GCA_046044395.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 99.09%
  • Contamination: 1.82%
  • Quality: 89.99
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Sequencing depth
11011.0 ×
Source
Other features
  • G+C Content: 47.5%
  • Coding Density: 90.31%
  • Codon Table: 11
  • N50: 23,014 bp
  • Contigs: 218
  • Largest Contig: 101,549 bp
  • Assembly Length: 3,635,779 bp
  • Ambiguous Assembly Fraction: 0.032%
Automated checks
Complete

Last modified 3 days ago

Sample Metadata

BioSample entries
Date
Collection Date: 2019-08
Location
Lat Lon: 31.483503 N 110.000844 E
Toponym
Geo Loc Name: China: Dajiu Lake
Environment
Sample Type: metagenomic assembly
Isolation Source: sediment
Env Broad Scale: lake
Other
Depth: 0 to 0.3 m
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples

Metadata retrieved 3 days ago

Sequencing Experiments

MDA sequencing of Magnetominuscus dajiuhuensis from Dajiuhu peatland, China
MDA sequencing of Magnetominuscus dajiuhuensis from Dajiuhu peatland, China
MDA sequencing of Magnetominuscus dajiuhuensis from Dajiuhu peatland, China
MDA sequencing of Magnetominuscus dajiuhuensis from Dajiuhu peatland, China
MDA sequencing of Magnetominuscus dajiuhuensis from Dajiuhu peatland, China
MDA sequencing of Magnetominuscus dajiuhuensis from Dajiuhu peatland, China
MDA sequencing of Magnetominuscus dajiuhuensis from Dajiuhu peatland, China
MDA sequencing of Magnetominuscus dajiuhuensis from Dajiuhu peatland, China
MDA sequencing of Magnetominuscus dajiuhuensis from Dajiuhu peatland, China
MDA sequencing of Magnetominuscus dajiuhuensis from Dajiuhu peatland, China
MDA sequencing of Magnetominuscus dajiuhuensis from Dajiuhu peatland, China
MDA sequencing of Magnetominuscus dajiuhuensis from Dajiuhu peatland, China
MDA sequencing of Magnetominuscus dajiuhuensis from Dajiuhu peatland, China
MDA sequencing of Magnetominuscus dajiuhuensis from Dajiuhu peatland, China


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