Genome sc|0003262

Genomics

Accession

NCBI Assembly:GCA_030587475.2

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 91.59%
• Contamination: 4.67%
• Quality: 68.24

Ribosomal and transfer RNA genes

• 0 16S rRNAs
• 0 23S rRNAs
• tRNAs for 21 amino acids

Source

• BioSample: SAMN32689773
• BioSample: SAMN35617918

Other features

• G+C Content: 55.13%
• Coding Density: 89.05%
• Codon Table: 11
• N50: 29,965 bp
• Contigs: 269
• Largest Contig: 90,011 bp
• Assembly Length: 4,986,501 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

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Last modified about 2 months ago

Sample Metadata

BioSample entries

• BioSample: SAMN32689773
• BioSample: SAMN35617918

Date

Collection Date: 2019-09

Location

Lat Lon: 24° 56′ 60″ N, 98° 26′ 24″ E

View sampling location map

Toponym

Geo Loc Name: China: Tengchong County, Yunnan

Environment

Sample Type: metagenomic assembly

Isolation Source: hot spring sediment

Env Broad Scale: hot spring

Env Local Scale: sediment

Env Medium: hot spring sediment

Other

Not detected

Package

Ncbi Submission Package: MIMAG.sediment.6.0

Biosamplemodel: MIMAG.sediment

All retrieved samples

• SAMN32689773: MIMAG Metagenome-assembled Genome sample from Candidatus Sigynarchaeum springense

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Metadata retrieved about 2 months ago