Genome sc|0003290


Database

INSDC Nucleotide

Accession

CP182357

Genomics

Accession
INSDC Nucleotide:CP182357
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 97.2%
  • Contamination: 3.8%
  • Quality: 78.2
Ribosomal and transfer RNA genes
  • 5 16S rRNAs (up to 100.0%)
  • 5 23S rRNAs (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
73.3 ×
Source
Other features
  • G+C Content: 33.37%
  • Coding Density: 92.3%
  • Codon Table: 11
  • N50: 2,579,799 bp
  • Contigs: 1
  • Largest Contig: 2,579,799 bp
  • Assembly Length: 2,579,799 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Last modified 4 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2016-07
Location
Lat Lon: 46° 30′ N, 63° 25′ 11″ W
View map of sampling locations
Toponym
Geo Loc Name: Canada: Prince Edward Island
Environment
Isolation Source: Lab-grown breviate-bacteria community • subtidal sediment
Other
Rel To Oxygen: anaerobe
Package
Ncbi Submission Package: MIMAG.sediment.6.0
Biosamplemodel: MIMAG.sediment • Metagenome or environmental
All retrieved samples

Metadata retrieved 4 months ago

Sequencing Experiments

Raw metagenomic sequencing reads for PCE
PCE


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