Genome sc|0003663

Genomics

Accession

NCBI Assembly:GCA_004376055.2

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 99.03%
• Contamination: 0.91%
• Quality: 94.48

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 21 amino acids

Sequencing depth

1000.0 ×

Source

• SRA: SRX14191677
• SRA: SRX14191676

Other features

• G+C Content: 42.0%
• Coding Density: 91.09%
• Codon Table: 11
• N50: 3,273,455 bp
• Contigs: 1
• Largest Contig: 3,273,455 bp
• Assembly Length: 3,273,455 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

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Last modified about 1 month ago

Sample Metadata

BioSample entries

• BioSample: SAMN11125809

Date

Collection Date: 2016-10-13

Location

Lat Lon: 55° 37′ 56″ N, 39° 44′ 38″ E

View map of sampling locations

Toponym

Geo Loc Name: Russia: Moscow region, Shatura district, Lake Beloe Bordukovskoe

Environment

Sample Type: metagenomic assembly

Isolation Source: enrichment culture inoculated with freshwater sediment

Other

Not detected

Package

Ncbi Submission Package: Microbe.1.0

Biosamplemodel: Microbe, viral or environmental

All retrieved samples

• SAMN11125809: Microbe sample from Nitrospirales bacterium LBB_01

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Metadata retrieved about 1 month ago