JSON

Genome sc|0003674

Name

Not registered

Database

NCBI Assembly

Accession

SAMN48697936

Marked for deletion

This genome is currently not registered as the nomenclatural type or the reference genome of any names in the Registry, and it will be purged from the database soon unless it is linked to a name

Genomics

Accession
NCBI Assembly:SAMN48697936
Cultures
Strain sc|0039572
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 95.42%
  • Contamination: 0.0%
  • Quality: 95.42
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 21 amino acids
Sequencing depth
25.0 ×
Source
Other features
  • G+C Content: 58.7%
Submitter comments
CheckM1 (v1.2.2) values are reported above, CheckM2 (v1.0.1) completeness and contamination is 93.21% and 2.37%, respectively. barrnap (v0.9) was used for rRNA genes and tRNAscan-SE (v2.0.11) was used to find tRNAs. tRNA-Selenocysteine is present.
Automated checks
Failed: Cannot find ncbi:assembly:SAMN48697936
Edit genome data
Last modified 2 months ago

Sample Metadata

BioSample entries
Date
Not detected
Location
Not detected
Toponym
Not detected
Environment
Not detected
Other
Not detected
Package
Not detected
All retrieved samples
Metadata retrieved 2 months ago


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