Genome sc|0000057


Database

NCBI Assembly

Accession

GCA_900290245.1

Genomics

Accession
NCBI Assembly:GCA_900290245.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 91.5%
  • Contamination: 2.8%
  • Quality: 77.5
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 17 amino acids
Source
Other features
  • G+C Content: 59.43%
  • Coding Density: 86.36%
  • Codon Table: 11
  • N50: 79,929 bp
  • Contigs: 162
  • Largest Contig: 269,762 bp
  • Assembly Length: 5,286,421 bp
  • Ambiguous Assembly Fraction: 0.016%
Automated checks
Complete

Last modified about 1 month ago

Sample Metadata

BioSample entries
Date
Collection Date: 2010-09-21
Location
Lat Lon: 50.131881 N 11.881046 E
Toponym
Geo Loc Name: Germany: Schloeppnerbrunnen fen II, Fichtel Mountains, northeastern Bavaria
Environment
Env Material: peat soil
Env Biome: fen
Other
Ph: 5-Apr
Depth: 0.1-0.2 m
Rel To Oxygen: anaerobe
Package
Ncbi Submission Package: MIGS.ba.soil.5.0
Biosamplemodel: MIGS/MIMS/MIMARKS.soil
All retrieved samples

Metadata retrieved about 1 month ago


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