Genome sc|0000699

Genomics

Accession

NCBI Assembly:GCF_000800805.1

Type

Enrichment Genome

Estimated Quality Metrics

• Completeness: 100.0%
• Contamination: 0.0%
• Quality: 100.0

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

37.0 ×

Source

• BioSample: SAMN03224143

Other features

• G+C Content: 49.21%
• Coding Density: 90.74%
• Codon Table: 11
• N50: 1,488,669 bp
• Contigs: 1
• Largest Contig: 1,488,669 bp
• Assembly Length: 1,488,669 bp
• Ambiguous Assembly Fraction: 0.0%

Submitter comments

The genome is complete (100%). Special efforts were undertaken to obtain full chromosome combining 454 and Sanger sequencing (Lang et al., 2015). 

Automated checks

Complete

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Last modified about 1 month ago

Sample Metadata

BioSample entries

• BioSample: SAMN03224143

Date

Collection Date: 2012

Location

Not detected

Toponym

Geo Loc Name: Germany

Environment

Sample Type: nd

Isolation Source: termite gut

Other

Not detected

Package

Ncbi Submission Package: Microbe.1.0

Biosamplemodel: Microbe, viral or environmental

All retrieved samples

• SAMN03224143: Microbe sample from Candidatus Methanoplasma termitum

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Metadata retrieved about 1 month ago