JSON

Genome sc|0000983

Name

“Segetimicrobium genomatis”

Database

INSDC Nucleotide

Accession

VBAK00000000

Genomics

Accession
INSDC Nucleotide:VBAK00000000
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 93.6%
  • Contamination: 4.2%
  • Quality: 72.6
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 21 amino acids
Sequencing depth
22.0 ×
Source
Other features
  • G+C Content: 68.94%
  • Coding Density: 91.37%
  • Codon Table: 11
  • N50: 35,544 bp
  • Contigs: 200
  • Largest Contig: 127,315 bp
  • Assembly Length: 3,702,252 bp
  • Ambiguous Assembly Fraction: 0.00068%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2014-09-03
Location
Lat Lon: 39.74 N 123.63 W
Toponym
Geo Loc Name: USA: Angelo Coast Range Reserve, CA
Environment
Sample Type: metagenomic assembly
Isolation Source: temperate grassland biome
Other
Not detected
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples
Metadata retrieved 2 months ago


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