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Nitrosoabyssus spongiisociaTs

Citation

Formal styling
Nitrosoabyssus spongiisociaTs Garritano et al., 2024
Effective publication
Garritano et al., 2024
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:_7ahflo9 (validated)
Canonical URL
https://seqco.de/i:32567

Nomenclature

Rank
Species
Syllabication
spon.gi.i.so'ci.a
Etymology
L. fem. n. spongia, sponge; L. masc. n. socius, companion; N.L. masc. n. spongiisocia, the companion of a sponge
Nomenclatural type
INSDC Nucleotide: CP136752.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
A ammonium-oxidising archaeon from the deep-sea that lives as a sponge symbiont
Classification
Archaea » Thermoproteota » Nitrososphaeria » Nitrosopumilales » Nitrosopumilaceae » Nitrosoabyssus » Nitrosoabyssus spongiisociaTs
Parent
Nitrosoabyssus

Genomics

Accession
INSDC Nucleotide:CP136752.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 0.0%
  • Quality: 100.0
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
2048.0 ×
Source
Other features
  • G+C Content: 34.13%
  • Coding Density: 89.11%
  • Codon Table: 11
  • N50: 1,455,463 bp
  • Contigs: 1
  • Largest Contig: 1,455,463 bp
  • Assembly Length: 1,455,463 bp
  • Ambiguous Assembly Fraction: 0.0056%
Automated checks
Complete
See additional details
Last modified about 1 month ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Thomas, Torsten over 1 year ago
Submitted by
Thomas, Torsten 10 months ago
Curators
Endorsed by
Rodriguez-R, Luis M 10 months ago
Validated by
Palmer, Marike 8 days ago
Date of priority
2024-10-11 04:56 AM (UTC)

Publications
1

Citation Title
Garritano et al., 2024, The ISME Journal Simple Porifera holobiont reveals complex interactions between the host, an archaeon, a bacterium, and a phage
Effective publication


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