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Ruminimicrobiellum caprinum

Citation

Formal styling
Ruminimicrobiellum caprinum Mies et al., 2024
Effective publication
Mies et al., 2024
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:tm1bm3q2 (validated)
Cannonical URL
https://seqco.de/i:32935

Nomenclature

Rank
Species
Syllabication
ca.pri'num
Etymology
L. neut. adj. caprinum, of or belonging to goats, referring to the isolation source
Nomenclatural type
NCBI Assembly: GCA_017413305.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
The species comprises only metagenome-assembled genomes. The species includes all bacteria with more than 95% average nucleotide identity (ANI) to the type genome. The GC content of the type genome is 33.0 mol% and the estimated genome size is 1.7 Mbp.
Classification
Bacteria » Elusimicrobiota » Endomicrobiia » Endomicrobiales » Endomicrobiaceae » Ruminimicrobiellum » Ruminimicrobiellum caprinum
Parent
Ruminimicrobiellum

Genomics

Accession
NCBI Assembly:GCA_017413305.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 90.95%
  • Contamination: 2.55%
  • Quality: 78.2
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 18 amino acids
Sequencing depth
30.0 ×
Source
Other features
  • G+C Content: 33.0%
  • Coding Density: 91.55%
  • Codon Table: 11
  • N50: 5,768 bp
  • Contigs: 342
  • Largest Contig: 39,049 bp
  • Assembly Length: 1,545,008 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Mies, Undine Sophie 8 months ago
Submitted by
Mies, Undine Sophie 19 days ago
Curators
Validated by
Rodriguez-R, Luis M 19 days ago
Date of priority
2024-05-29 02:02 PM (UTC)

Publications
1

Citation Title
Mies et al., 2024, mBio Genome reduction and horizontal gene transfer in the evolution of Endomicrobia—rise and fall of an intracellular symbiosis with termite gut flagellates
Effective publication


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