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Genomes of the “ Candidatus Actinomarinales” Order: Highly Streamlined Marine Epipelagic Actinobacteria

Citation
López-Pérez et al. (2020). mSystems 5 (6)
Names
“Actinomarinales”
Abstract
Microbiology is in a new age in which sequence databases are primary sources of information about many microbes. However, in-depth analysis of environmental genomes thus retrieved is essential to substantiate the new knowledge.

Diversity and Genomic Characterization of a Novel Parvarchaeota Family in Acid Mine Drainage Sediments

Citation
Luo et al. (2020). Frontiers in Microbiology 11
Names
“Acidifodinimicrobiaceae” “Acidifodinimicrobium”
Abstract
Recent genome-resolved metagenomic analyses of microbial communities from diverse environments have led to the discovery of many novel lineages that significantly expand the phylogenetic breadth of Archaea. Here, we report the genomic characterization of a new archaeal family based on five metagenome-assembled genomes retrieved from acid mine drainage sediments. Phylogenomic analyses placed these uncultivated archaea at the root of the candidate phylum Parvarchaeota, which expand this lesser-kno

Long-Chain Fatty Acids Degradation by Desulfomonile Species and Proposal of “Candidatus Desulfomonile Palmitatoxidans”

Citation
Alves et al. (2020). Frontiers in Microbiology 11
Names
Ca. Desulfomonile Ca. Desulfomonile palmitatoxidans
Abstract
Microbial communities with the ability to convert long-chain fatty acids (LCFA) coupled to sulfate reduction can be important in the removal of these compounds from wastewater. In this work, an enrichment culture, able to oxidize the long-chain fatty acid palmitate (C16:0) coupled to sulfate reduction, was obtained from anaerobic granular sludge. Microscopic analysis of this culture, designated HP culture, revealed that it was mainly composed of one morphotype with a typical collar-like cell wal

Isolation of a member of the candidate phylum ‘Atribacteria’ reveals a unique cell membrane structure

Citation
Katayama et al. (2020). Nature Communications 11 (1)
Names
Atribacter Atribacteria Atribacterota
Abstract
AbstractA key feature that differentiates prokaryotic cells from eukaryotes is the absence of an intracellular membrane surrounding the chromosomal DNA. Here, we isolate a member of the ubiquitous, yet-to-be-cultivated phylum ‘Candidatus Atribacteria’ (also known as OP9) that has an intracytoplasmic membrane apparently surrounding the nucleoid. The isolate, RT761, is a subsurface-derived anaerobic bacterium that appears to have three lipid membrane-like layers, as shown by cryo-electron tomograp

Phylogeny of ATP/ADP translocase gene from Candidatus Liberibacter spp., causal agents of HLB

Citation
Flores-de la Rosa et al. (2020). Revista Mexicana de Fitopatología, Mexican Journal of Phytopathology 39 (1)
Names
Liberibacter
Abstract
<p>Las bacterias causantes del huanglongbing (HLB), <em>Canditatus</em> Liberibacter spp., son bacterias obligadas al floema de los cítricos y a diferentes sistemas del insecto vector,<em> Diaphorina citri</em>, por lo tanto, el enfoque genómico ha sido útil para estudiar sus mecanismos de patogenicidad. Dicho enfoque ha permitido identificar una copia homóloga del gen codificante de la enzima ATP/ADP translocasa, la cual tiene la capacidad de importar ATP y nucleót

Draft Genome Sequence of a Filamentous Anoxygenic Phototrophic Bacterium, “ Candidatus Roseilinea sp. Strain NK_OTU-006,” Recovered from Metagenomic Data of a Hot Spring Microbial Mat

Citation
Martinez et al. (2020). Microbiology Resource Announcements 9 (50)
Names
“Roseilinea”
Abstract
We report here the metagenome-assembled draft genome of an uncultured filamentous anoxygenic phototroph of the phylum Chloroflexota (formerly Chloroflexi ), “ Candidatus Roseilinea sp. strain NK_OTU-006,” recovered from hot spring-associated microbial mats. The 3.6-Mb genome is estimated to be 94% complete and comprises 117 contigs encoding 3,203 predicted genes, including a full-length rRNA operon.