Publications

4157

Sunhemp (Crotalaria juncea L.) is a tropical leguminous crop valued for its multifaceted utility in fiber production, green manuring, and as a raw material in the manufacture of paper and rope. One of the major biotic stresses affecting sunhemp is phyllody disease, caused by a phytoplasma, specifically belonging to the “Candidatus Phytoplasma” spp. These are obligate intracellular pathogens classified under the class Mollicutes, and are primarily transmitted by sap-sucking insect vectors such as leafhoppers, and psyllids. Phyllody-infected plants exhibit a range of morphological abnormalities, including malformed floral structures, chlorosis, stunted growth, and proliferation of axillary shoots, resulting in significant agronomic losses. In the present study, the sunhemp genotype NTPSH 11-02 was subjected to gamma irradiation at doses of 20 kR, 30 kR, 40 kR, and 50 kR to induce genetic variability. The M₂ generation lines derived from these treatments were evaluated under natural field conditions to assess their resistance to phyllody. Out of 44 mutant genotypes, two genotypes, NTPSH 63 and NTPSH 32 exhibited moderate resistance to phyllody, while nine genotypes—NTPSH 24, NTPSH 31, NTPSH 36, NTPSH 39, NTPSH 41, NTPSH 48, NTPSH 53, NTPSH 56, and NTPSH 60 demonstrated a tolerant reaction under natural infestation. Phyllody infection was found to negatively impact key yield-contributing traits, including plant height, number of pods per plant, and 100-seed weight (test weight). A significant reduction in these parameters was observed in infected plants compared to healthy controls, underscoring the detrimental effect of phyllody on overall productivity and crop performance.

Black abalone Haliotis cracherodii from California, USA, and Baja California, Mexico, have faced massive population declines for more than 30 yr. The main factors contributing to these declines have been overfishing, pollution, climate change, and lethal diseases, such as withering syndrome, caused by the intracellular bacterium Candidatus Xenohaliotis californiensis (CXc). In recent years, the presence of an associated bacteriophage, pCXc, infecting CXc was detected and reported in some abalone species from California and Baja California. In the present study, 199 black abalone fecal samples from 14 sites along the Baja California coast were analyzed for the presence of CXc and pCXc DNA. The overall prevalence of bacteria and phage-infected bacteria was 44 and 38%, respectively. We found significant differences in the relationship between the prevalence and the mean lengths of abalone throughout the study area. This result is probably due to differences in the size-frequency distribution between sampling zones. The only site where we found a relationship between prevalence and length was in Isla Todos Santos. We did not see a relationship between abalone density and the prevalence of the bacteria and the phage. Additionally, we found a positive but non-significant correlation in prevalence between CXc and pCXc. This study is the first to detect the presence of pCXc DNA in wild populations of black abalone of Baja California.

AbstractBACKGROUNDAutophagy is a conserved mechanism by which eukaryotic organisms defend against pathogen infection. However, the molecular mechanisms underlying the role of autophagy in the interactions of insect vectors with the phloem‐limited bacterial pathogen remain unclear. The citrus Huanglongbing (HLB)‐associated pathogen ‘Candidatus Liberibacter asiaticus’ (CLas) seriously endangers development of the citrus industry. It spreads via Diaphorina citri in a persistent and propagative manner.RESULTSIn this study, a total of 30 autophagy‐related genes (ATG) were identified in the D. citri genome, among which multiple genes were significantly regulated after CLas infection. Concurrently, CLas infection also leads to an increased number of autophagosomes and enhanced accumulation of ATG8‐II. Ultrastructural observations revealed the presence of bacterial‐like structures within autophagosomes in the midgut of CLas‐infected D. citri. Furthermore, both activation and inhibition of autophagy significantly influenced CLas titers. However, autophagy cannot completely eliminate CLas in D. citri. We identified a CLas effector, SDE4040 (CLIBASIA_04040), that interacts with DcATG8 and co‐localizes on autophagosomes in D. citri. Co‐expression of SDE4040 and DcATG8 induces autophagy in Spodoptera frugiperda (Sf9) cells.CONCLUSIONTaken together, these results indicate that CLas infection activates the autophagy pathway in D. citri, contributing to a reduction in bacterial titer. Our data also revealed that CLas may trigger complex interactions with the insect. © 2025 Society of Chemical Industry.

ABSTRACTSesame phyllody, a destructive disease caused by phytoplasma infection, induces severe morphological abnormalities, including floral virescence, phyllody, witches' broom, leaf deformation, and stunted growth. This study aimed to characterize phytoplasma isolates from diverse regions of India, identifying them as Candidatus Phytoplasma asteris (16Sr‐I), Candidatus Phytoplasma citri (16Sr‐II), and Candidatus Phytoplasma australasia (16Sr‐II). Whole‐genome sequencing of Candidatus Phytoplasma asteris isolate SPGN revealed a genome size of 563,754 bp, encoding 542 proteins, including several genes associated with antibiotic resistance. Effector prediction analysis identified key virulence‐associated proteins, such as SAP50‐like, SAP34‐like, TENGU‐su inducer, and immunodominant membrane proteins, which manipulate host development and immune responses. Transcriptomic analysis of infected sesame plants revealed significant gene expression alterations, with upregulated genes linked to floral malformation, vascular tissue modifications, and stress responses, while the downregulated genes were associated with flavonoid metabolism and immune signaling. Phytoplasma infection disrupted hormonal pathways, leading to increased expression of auxin, cytokinin, and gibberellin‐related genes, suggesting hormonal dysregulation as a key factor in symptom development. Furthermore, immune suppression was evident through the downregulation of key defense‐related genes, including those involved in MAPK signaling and pathogenesis‐related protein families. These findings enhance our understanding of phytoplasma pathogenesis in sesame and provide potential targets for developing effective disease management strategies.

Candidatus phytoplasma affects a wide range of host plants. In recent years, the severity and distribution of the disease have increase many fold. The present study isolated the pathogen from leaves (chlorosis), dried branches, and the other tissues of the infected tree. Acacia trees (n=15) showing severe yellowing and desiccation in the landscape areas of Şanlıurfa province were sampled from the buds (V-shaped) in three different parts of the branches, backward from the top of the branches during the flowering period, and from the middle veins of the leaves on the same branch during the leafing period. Samples were initially amplified using the universal primer pair R16F1/R16R0 and subsequently subjected to nested PCR with the primer pair R16F2n/R2. The results indicated that, on average, 2 out of 15 buds collected from the apical parts of the branches, 11 out of 15 from the middle, and 6 out of 15 from the basal parts were infected with ‘Candidatus Phytoplasma australasia’. Moreover, all samples collected from the midribs of these 15 trees were found to be infected with Ca. P. australasia.

Citrus greening or Huanglongbing (HLB) is a rapidly spreading disease caused by Candidatus Liberibacter species, which inhabit the phloem of citrus plants. It is primarily transmitted by psyllid insects. Managing HLB is challenging due to the bacterium's phloem-restricted nature, making diagnosis and treatment with antimicrobials difficult. Here in the present study, the bacterial consensus sequences were used for the primer design with In silico approaches and validated by PCR. The study was carried out in the Malwa region of Madhya Pradesh, India, which is known for citrus cultivations and remains affected by the HLB disease. Phylogenetic analysis of 100 Candidatus Liberibacter 16S rRNA sequences from NCBI was conducted using MEGA 6, with Malwa-specific refinement via MAFFT alignment. Eight previously deposited sequences formed the basis for the study. A consensus sequence was derived and used to design region-specific primers with GeneFisher. PCR validation was carried out with standard thermal cycling and gel electrophoresis. Phylogenetic analysis of 100 Candidatus Liberibacter 16S rRNA sequences from NCBI was conducted using Phylogenetic analysis showed high genetic variation among Liberibacter strains, supporting the need for region-specific detection. Eight sequences from the Malwa region were aligned using BioEdit, confirming conserved primer sites. Consensus primers were designed using GeneFisher and optimized for 16S rRNA targets. PCR validation identified 22 positives out of 100 samples, with primer set 2 detecting all target species effectively. The study concludes that primer set 2 enables rapid and accurate detection of HLB-causing bacteria in the Malwa region.