| Reported in | Status | Registered by | ||
|---|---|---|---|---|
| Flavobacterium dongtanense | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium dispersum | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium denitrificans | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium degerlachei | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium defluvii | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium dasani | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium dankookense | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium daemonense | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium daejeonense | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium cyanobacteriorum | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium cutihirudinis | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium cupreum | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium cucumis | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium crocinum | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium croceum | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium crassostreae | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium compostarboris | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium commune | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium columnare | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium collinsii | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium collinsense | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium circumlabens | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium chungnamense | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium chungbukense | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium chungangense | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium chuncheonense | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium chryseum | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium chilense | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium cheonhonense | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago | |
| Flavobacterium cheongpyeongense | Unknown | Valid (ICNP) | Excubia bot almost 3 years ago |