Strain sc|0019442

StrainInfo: SI-ID 8055 ^T

Taxon

Streptococcus phocae (not Streptococcus phocae subsp. phocae)

Sample

Seal with pneumonia, liver (NO)

Cultures (7)

LMG 16735 = CCUG 35103 = NCTC 12719 = ATCC 51973 = CIP 104665 = NCIMB 13401 = DSM 15635

Other Designations (9)

SVL 1932 = SVL 8399H1T = SVL 8399H1 T = 8399 H1 = 8399 H1 T = 8399 = 8399H1T = SVL 8399 H1 = 8399H1

Sequences (14)

• Gene Nucleotide:AM269660
  Streptococcus phocae partial rpoA gene for RNA polymerase alpha subunit, type strain LMG 16735T
• Gene Nucleotide:AM269570
  Streptococcus phocae partial pheS gene for phenylalanyl-tRNA synthase alpha subunit, type strain LMG 16735T
• Gene Nucleotide:AM269714
  Streptococcus phocae partial atpA gene for ATP synthase alpha subunit, type strain LMG 16735T
• Gene Nucleotide:AJ511670
  Streptococcus phocae partial rnpB gene for ribonuclease P RNA, strain ATCC 51973 (CCUG 35103)
• rRNA Operon Nucleotide:AJ621053
  Streptococcus phocae partial 16S rRNA gene, strain CCUG 35103
• rRNA Operon Nucleotide:AF489596
  Streptococcus phocae strain NCTC 12719 16S-23S rRNA intergenic spacer region, complete sequence
• Gene Nucleotide:AJ547799
  Streptococcus phocae partial sodA gene for manganese-dependent superoxide dismutase
• Gene Nucleotide:AJ555624
  Streptococcus phocae partial cpn60 gene for chaperonin 60, strain NCTC 12719
• rRNA Operon Nucleotide:AF235052
  Streptococcus phocae 16S ribosomal RNA gene, partial sequence
• Genome Assembly:GCA_001302265
  Streptococcus phocae ATCC 51973
• Gene Nucleotide:EU003755
  Streptococcus phocae strain CIP 104665 DNA gyrase subunit B (gyrB) gene, partial cds
• Gene Nucleotide:EU917237
  Streptococcus phocae strain CIP104665 DNA recombination/repair protein (recN) gene, partial cds
• Gene Nucleotide:DQ232456
  Streptococcus phocae strain CIP 104665 RNA polymerase beta subunit (rpoB) gene, partial cds
• Gene Nucleotide:EU003708
  Streptococcus phocae strain CIP 104665 chaperonin GroEL (groEL) gene, partial cds

Associated Publications (5)

• DOI: 10.1111/j.1365-2761.2008.01014.x
  Valdes I, Jaureguiberry B, Romalde JL, Toranzo AE, Magarinos B, Avendano-Herrera R (2009). Genetic characterization of Streptococcus phocae strains isolated from Atlantic salmon, Salmo salar L., in Chile.
• DOI: 10.1111/j.1365-2761.2012.01361.x
  Cortez-San Martin M, Gonzalez-Contreras A, Avendano-Herrera R (2012). Infectivity study of Streptococcus phocae to seven fish and mammalian cell lines by confocal microscopy.
• DOI: 10.1128/genomeA.01307-15
  Avendano-Herrera R, Poblete-Morales M (2015). Genome Sequence of Streptococcus phocae subsp. phocae Strain ATCC 51973T Isolated from a Harbor Seal (Phoca vitulina).
• DOI: 10.1016/j.fsi.2016.02.005
  Salazar S, Oliver C, Yanez AJ, Avendano-Herrera R (2016). Comparative analysis of innate immune responses to Streptococcus phocae strains in Atlantic salmon (Salmo salar) and rainbow trout (Oncorhynchus mykiss).
• DOI: 10.1016/j.margen.2016.09.005
  Bethke J, Avendano-Herrera R (2016). Comparative genome analysis of two Streptococcus phocae subspecies provides novel insights into pathogenicity.

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID8055.3

Retrieved about 1 month ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:19442

Local history

• Registered 8 months ago
• Last modified about 1 month ago