Strain sc|0029848

StrainInfo: SI-ID 5045 ^T

Taxon

Vibrio aestuarianus (not Vibrio aestuarianus subsp. aestuarianus)

Sample

Oyster (US)

Cultures (13)

LMG 7909 = ATCC 35048 = CCUG 28583 = CECT 625 = NCMB 2236 = CIP 102971 = NCIMB 2236 = IFO 15629 = KCTC 2714 = NBRC 15629 = BCRC 15894 = CCRC 15894 = DSM 19606

Other Designations (7)

CAIM 592 = OY-0-002 = HUFP 9201 = D.L.Tison OY-0-002 = OY-O-002 = Tison OY-0-002 = LMG 7909T QC 2/99

Sequences (23)

• Gene Nucleotide:AJ842554
  Vibrio aestuarianus partial rpoA gene for RNA polymerase alpha-subunit, strain LMG 7909T
• Gene Nucleotide:AJ580855
  Vibrio aestuarianus partial mRNA for recombination-repair protein (recA gene), type strain LMG 7909T
• Gene Nucleotide:DQ907331
  Vibrio aestuarianus strain LMG7909 FtsZ (ftsZ) gene, partial cds
• Gene Nucleotide:AJ842369
  Vibrio aestuarianus partial recA gene, strain LMG 7909T
• Gene Nucleotide:DQ907469
  Vibrio aestuarianus strain LMG7909 topoisomerase I (topA) gene, partial cds
• Gene Nucleotide:AB298200
  Vibrio aestuarianus gyrB gene for gyrase B subunit, partial cds
• Gene Nucleotide:DQ907402
  Vibrio aestuarianus strain LMG7909 rod shaping protein MreB (mreB) gene, partial cds
• Gene Nucleotide:EF601228
  Vibrio aestuarianus strain LMG 7909 ATPase (atpA) gene, partial cds
• Gene Nucleotide:DQ907271
  Vibrio aestuarianus strain LMG7909 glyceraldehyde-3-phosphate dehydrogenase (gapA) gene, partial cds
• Genome Assembly:GCA_012395185
  Vibrio aestuarianus LMG 7909
• rRNA Operon Nucleotide:AF412991
  Vibrio aestuarianus strain ATCC 35048 16S-23S ribosomal RNA intergenic spacer, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence
• rRNA Operon Nucleotide:X05041
  Listonella (Vibrio) aestuarianus (ATCC 35048) 5S rRNA
• rRNA Operon Nucleotide:AF412993
  Vibrio aestuarianus strain ATCC 35048 16S-23S ribosomal RNA intergenic spacer, partial sequence; tRNA-Glu gene, complete sequence
• Gene Nucleotide:AM183574
  Vibrio aestuarianus partial toxR gene for transmembrane regulatory protein, strain ATCC35048
• Gene Nucleotide:EF064424
  Vibrio aestuarianus strain 9014-83 RNA polymerase beta subunit (rpoB) gene, partial cds
• Gene Nucleotide:AB050814
  Vibrio aestuarianus sodB gene for iron-cofactored superoxide dismutase, partial cds
• rRNA Operon Nucleotide:AF412992
  Vibrio aestuarianus strain ATCC 35048 16S-23S ribosomal RNA intergenic spacer, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence
• rRNA Operon Nucleotide:X74689
  V.aestuarianus (ATCC 35048T) gene for 16S ribosomal RNA
• rRNA Operon Nucleotide:AF412995
  Vibrio aestuarianus strain ATCC 35048 16S-23S ribosomal RNA intergenic spacer, partial sequence; tRNA-Glu and tRNA-Val genes, complete sequence
• rRNA Operon Nucleotide:D11240
  Vibrio aestuarianus 16S rRNA
• rRNA Operon Nucleotide:D11191
  Vibrio aestuarianus 16S rRNA
• rRNA Operon Nucleotide:AF412994
  Vibrio aestuarianus strain ATCC 35048 16S-23S ribosomal RNA intergenic spacer, partial sequence; tRNA-Ala gene, complete sequence
• rRNA Operon Nucleotide:AB680915
  Vibrio aestuarianus gene for 16S rRNA, partial sequence, strain: NBRC 15629

Associated Publications (9)

• DOI: 10.1099/IJS.0.02670-0
  Gomez-gil B, Thompson FL, Thompson CC, Swings J (2003). Vibrio pacinii sp. nov., from cultured aquatic organisms
• DOI: 10.1099/00207713-44-3-416
  Ruimy R, Boussemart O, Christen R, Elbaze P, Lafay B, Gauthier M, Breittmayer V (1994). Phylogenetic Analysis and Assessment of the Genera Vibrio, Photobacterium, Aeromonas, and Plesiomonas Deduced from Small-Subunit rRNA Sequences
• DOI: 10.1078/0723-2020-00109
  Gyllenberg M, Lund T, Koski T, Swings J, Thompson F, Dawyndt P, Austin B (2002). New Methods for the Analysis of Binarized BIOLOG GN Data of Vibrio species: Minimization of Stochastic Complexity and Cumulative Classification
• DOI: 10.1099/00207713-45-1-134
  Ishimaru K, Akagawa-matsushita M, Muroga K (1995). Vibrio penaeicida sp. nov., a Pathogen of Kuruma Prawns (Penaeus japonicus)
• DOI: 10.1111/J.1574-6941.2002.TB00934.X
  Robert-pillot A, Baron S, Lesne J, Fournier J, Quilici M (2002). Improved specific detection of Vibrio cholerae in environmental water samples by culture on selective medium and colony hybridization assay with an oligonucleotide probe
• DOI: 10.1016/J.SYAPM.2008.06.003
  Garnier M, Labreuche Y, Nicolas J (2008). Molecular and phenotypic characterization of Vibrio aestuarianus subsp. francensis subsp. nov., a pathogen of the oyster Crassostrea gigas
• DOI: 10.1099/IJSEM.0.004654
  Garcia C, Moussa M, Gonçalves de sa A, Dégremont L, Mesnil A, Godfrin Y, Dubreuil C, Tourbiez D, Chollet B, Travers M, Serpin D (2021). Vibrio aestuarianus subsp. cardii subsp. nov., pathogenic to the edible cockles Cerastoderma edule in France, and establishment of Vibrio aestuarianus subsp. aestuarianus subsp. nov. and Vibrio aestuarianus subsp. francensis subsp. nov.
• DOI: 10.1099/IJSEM.0.004766
  Oren A, Garrity GM (2021). Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 71, part 2 of the IJSEM
• DOI: 10.1099/00207713-33-4-699
  Tison DL, Seidler RJ (1983). Vibrio aestuarianus: a New Species from Estuarine Waters and Shellfish

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID5045.2

Retrieved 9 days ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:29848

Local history

• Registered 18 days ago
• Last modified 9 days ago