Strain sc|0038331

StrainInfo: SI-ID 4080

Taxon

Pseudomonas asplenii (not Pseudomonas fuscovaginae)

Sample

Oryza sativa (JP)

Cultures (14)

LMG 2158 = ICMP 5940 = NCPPB 3085 = PDDCC 5940 = CCUG 32780 = CIP 106695 = DSM 7231 = NCCB 95042 = LMD 95.42 = BCRC 17126 = CCRC 17126 = CFBP 2065 = KACC 10676 = CFBP 2801

Other Designations (5)

Tanii 6801 = LMG 2158T QC 12/02 = NZRCC 10260 = 6801 = Zeigler R.S. BCE3

Sequences (10)

• Gene Nucleotide:JF901418
  Pseudomonas fuscovaginae strain LMG 2158 major outer membrane lipoprotein I (oprI) gene, partial cds
• Gene Nucleotide:JF901509
  Pseudomonas fuscovaginae strain LMG 2158 peptidoglycan-associated lipoprotein OprL (oprL) gene, partial cds
• Gene Nucleotide:FN554185
  Pseudomonas fuscovaginae partial gyrB gene for DNA gyrase subunit B, type strain LMG 2158T
• Gene Nucleotide:FN554467
  Pseudomonas fuscovaginae partial rpoD gene for DNA-directed RNA polymerase subunit D, type strain LMG 2158T
• Gene Nucleotide:AJ717433
  Pseudomonas fuscovaginae partial rpoB gene for DNA-directed RNA polymerase beta chain, strain LMG 2158T
• Genome Assembly:GCA_900108595
  Pseudomonas fuscovaginae LMG 2158
• Gene Nucleotide:FJ483529
  Pseudomonas fuscovaginae strain ICMP 5940 RNA polymerase subunit B (rpoB) gene, partial cds
• rRNA Operon Nucleotide:FJ483519
  Pseudomonas fuscovaginae strain ICMP 5940 16S ribosomal RNA gene, partial sequence
• Genome Assembly:GCA_000467065
  Pseudomonas fuscovaginae ICMP 5940 ICMP5940
• Gene Nucleotide:GQ996723
  Pseudomonas fuscovaginae strain BCRC 17126 DNA gyrase subunit B (gyrB) gene, partial cds

Associated Publications (1)

• DOI: 10.1099/ijsem.0.004199
  Tohya M, Watanabe S, Tada T, Tin HH, Kirikae T (2020). Genome analysis-based reclassification of Pseudomonas fuscovaginae and Pseudomonas shirazica as later heterotypic synonyms of Pseudomonas asplenii and Pseudomonas asiatica, respectively.

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID4080.3

Retrieved about 1 month ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:38331

Local history

• Registered 8 months ago
• Last modified about 1 month ago