Strain sc|0017325

StrainInfo: SI-ID 3682 ^T

Taxon

Brucella intermedia (not Ochrobactrum intermedium)

Sample

Blood culture (FR)

Cultures (11)

LMG 3301 = NCTC 12171 = CCUG 24694 = CIP 105838 = IFO 15820 = CCM 7179 = NBRC 15820 = BCRC 17247 = CCRC 17247 = DSM 17986 = VTT E-991166

Other Designations (4)

CNS 2-75 = strain CL 350/83 = LMG 3301T QC 3/02 = LMG3301T QC 1/92

Sequences (30)

• Gene Nucleotide:AM422944
  Ochrobactrum intermedium partial recA gene for recombinase A, type strain LMG 3301T
• Gene Nucleotide:KF825193
  Ochrobactrum intermedium strain LMG3301T 70 kDa heat shock protein (dnaK) gene, partial cds
• rRNA Operon Nucleotide:AJ867343
  Ochrobactrum intermedium 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, type strain LMG 3301, allele D
• Gene Nucleotide:DQ399819
  Ochrobactrum intermedium strain LMG3301 70 kDa heat shock protein (dnaK) gene, partial cds
• Gene Nucleotide:KF825416
  Ochrobactrum intermedium strain LMG3301T DNA-dependent rNA polymerase beta subunit (rpoB) gene, partial cds
• rRNA Operon Nucleotide:U70978
  Ochrobactrum intermedium LMG 3301 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:KF825390
  Ochrobactrum intermedium strain LMG3301T recombinase A (recA) gene, partial cds
• Gene Nucleotide:KF825308
  Ochrobactrum intermedium strain LMG3301T 25 kDa outer membrane protein (omp25) gene, partial cds
• Gene Nucleotide:KF825255
  Ochrobactrum intermedium strain LMG3301T glyceraldehyde-3-phosphate dehydrogenase (gap) gene, partial cds
• Gene Nucleotide:AM884778
  Ochrobactrum intermedium partial fumC gene for fumrate hydratase C, strain LMG 3301
• rRNA Operon Nucleotide:AJ867342
  Ochrobactrum intermedium 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, type strain LMG 3301, allele C
• Gene Nucleotide:DQ926693
  Ochrobactrum intermedium strain LMG 3301 DNA-dependent RNA polymerase beta subunit (rpoB) gene, partial cds
• Gene Nucleotide:AM884804
  Ochrobactrum intermedium partial soxA gene for sarcosine oxidase, strain LMG 3301
• rRNA Operon Nucleotide:AJ867340
  Ochrobactrum intermedium 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, type strain LMG 3301, allele A
• Gene Nucleotide:KF825099
  Ochrobactrum intermedium strain LMG3301T chorismate synthase (aroC) gene, partial cds
• Gene Nucleotide:AM884794
  Ochrobactrum intermedium partial prpE gene for propionate-CoA ligase, strain LMG 3301
• rRNA Operon Nucleotide:AM490623
  Ochrobactrum intermedium partial 16S rRNA gene, strain LMG 3301T
• Gene Nucleotide:KF825523
  Ochrobactrum intermedium strain LMG3301T anthranilate synthase (trpE) gene, partial cds
• rRNA Operon Nucleotide:AJ867341
  Ochrobactrum intermedium 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, type strain LMG 3301, allele B
• rRNA Operon Nucleotide:AJ867344
  Ochrobactrum intermedium 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, type strain LMG 3301, allele E
• Gene Nucleotide:AM884766
  Ochrobactrum intermedium partial fbaA gene for fructose bisphosphate aldolase, strain LMG 3301
• Genome Assembly:GCA_000182645
  Brucella intermedia LMG 3301
• Genome Assembly:GCA_900454225
  Brucella intermedia NCTC12171
• rRNA Operon Nucleotide:AM114411
  Ochrobactrum intermedium partial 16S rRNA gene, type strain CCUG 24694T
• Gene Nucleotide:AM087913
  Ochrobactrum intermedium partial recA gene for recombinase A, type strain CCUG 24694T
• Genome Assembly:GCA_012103055
  Brucella intermedia CIP 105838
• rRNA Operon Nucleotide:AB680967
  Ochrobactrum intermedium gene for 16S rRNA, partial sequence, strain: NBRC 15820
• rRNA Operon Nucleotide:MN526996
  Ochrobactrum intermedium strain NBRC 15820 16S ribosomal RNA gene, partial sequence.
• rRNA Operon Nucleotide:MW020173
  Ochrobactrum intermedium strain NBRC 15820 16S ribosomal RNA gene, partial sequence.
• rRNA Operon Nucleotide:OQ874666
  Brucella intermedia strain NBRC 15820 16S ribosomal RNA gene, partial sequence.

Associated Publications (9)

• DOI: 10.1016/s0008-6215(97)10029-5
  Velasco J, Moll H, Knirel YA, Sinnwell V, Moriyon I, Zahringer U (1998). Structural studies on the lipopolysaccharide from a rough strain of Ochrobactrum anthropi containing a 2,3-diamino-2,3-dideoxy-D-glucose disaccharide lipid A backbone.
• Dharne MS, Misra SP, Misra V, Dwivedi M, Patole MS, Shouche YS (2008). Isolation of urease-positive Ochrobactrum intermedium in the stomach of a non-ulcer dyspeptic patient from north India.
• DOI: 10.1186/1757-4749-5-7
  Kulkarni G, Dhotre D, Dharne M, Shetty S, Chowdhury S, Misra V, Misra S, Patole M, Shouche Y (2013). Draft genome of Ochrobactrum intermedium strain M86 isolated from non-ulcer dyspeptic individual from India.
• DOI: 10.3389/fmicb.2017.01207
  Jackel C, Hertwig S, Scholz HC, Nockler K, Reetz J, Hammerl JA (2017). Prevalence, Host Range, and Comparative Genomic Analysis of Temperate Ochrobactrum Phages.
• DOI: 10.1016/j.syapm.2005.11.003
  Lebuhn M, Bathe S, Achouak W, Hartmann A, Heulin T, Schloter M (2005). Comparative sequence analysis of the internal transcribed spacer 1 of Ochrobactrum species.
• DOI: 10.1099/ijs.0.013987-0
  Imran A, Hafeez FY, Fruhling A, Schumann P, Malik KA, Stackebrandt E (2009). Ochrobactrum ciceri sp. nov., isolated from nodules of Cicer arietinum.
• DOI: 10.1128/AEM.02141-13
  Johnning A, Moore ER, Svensson-Stadler L, Shouche YS, Larsson DG, Kristiansson E (2013). Acquired genetic mechanisms of a multiresistant bacterium isolated from a treatment plant receiving wastewater from antibiotic production.
• DOI: 10.1631/jzus.B1500029
  Chai LJ, Jiang XW, Zhang F, Zheng BW, Shu FC, Wang ZL, Cui QF, Dong HP, Zhang ZZ, Hou DJ, She YH (2015). Isolation and characterization of a crude oil degrading bacteria from formation water: comparative genomic analysis of environmental Ochrobactrum intermedium isolate versus clinical strains.
• DOI: 10.1099/ijs.0.027631-0
  Kampfer P, Huber B, Busse HJ, Scholz HC, Tomaso H, Hotzel H, Melzer F (2010). Ochrobactrum pecoris sp. nov., isolated from farm animals.

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID3682.3

Retrieved 5 months ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:17325

Local history

• Registered 11 months ago
• Last modified 5 months ago