Strain sc|0017366

StrainInfo: SI-ID 386953 ^T

Taxon

Clavibacter michiganensis subsp. michiganensis (not Clavibacter michiganensis^T)

Sample

Lycopersicon esculentum (HU)

Cultures (14)

LMG 7333 = ICMP 2550 = NCPPB 2979 = PDDCC 2550 = CCUG 23363 = CIP 104846 = DSM 46364 = IMET 11518 = JCM 9665 = VKM Ac-1403 = CFBP 2352 = KACC 20122 = CFBP 4999 = VTT E-97058

Other Designations (11)

NZRCC 10213 = Dye CC31 = Klement SO5 = ICPB CM177 = ICPV CM177 = LMG 7333T QC 10/99 = IMSNU 21316 = PDDCC 2550a = ICPB CM 177 = S 05 = SO5

Sequences (42)

• rRNA Operon Nucleotide:JN603289
  Clavibacter michiganensis subsp. michiganensis strain LMG 7333 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence
• rRNA Operon Nucleotide:U09762
  Clavibacter michiganensis michiganensis LMG 7333 16S rRNA
• rRNA Operon Nucleotide:JN603277
  Clavibacter michiganensis subsp. michiganensis strain LMG 7333 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:JX259296
  Clavibacter michiganensis subsp. michiganensis strain LMG 7333T chromosomal replication initiation protein (dnaA) gene, partial cds
• rRNA Operon Nucleotide:FR728336
  Clavibacter michiganensis subsp. michiganensis partial 16S rRNA gene, strain LMG7333T
• Gene Nucleotide:FR728065
  Clavibacter michiganensis subsp. michiganensis partial gyrB gene for gyrase B, strain LMG7333T
• rRNA Operon Nucleotide:JN603291
  Clavibacter michiganensis subsp. michiganensis strain LMG 3687 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence
• rRNA Operon Nucleotide:JN603279
  Clavibacter michiganensis subsp. michiganensis strain LMG 3687 16S ribosomal RNA gene, partial sequence
• rRNA Operon Nucleotide:JN603278
  Clavibacter michiganensis subsp. michiganensis strain LMG 3681 16S ribosomal RNA gene, partial sequence
• rRNA Operon Nucleotide:JN603290
  Clavibacter michiganensis subsp. michiganensis strain LMG 3681 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence
• rRNA Operon Nucleotide:JN603293
  Clavibacter michiganensis subsp. michiganensis strain LMG 3679 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence
• rRNA Operon Nucleotide:JN603281
  Clavibacter michiganensis subsp. michiganensis strain LMG 3679 16S ribosomal RNA gene, partial sequence
• Genome Assembly:GCA_021216655
  Clavibacter michiganensis LMG7333
• Genome Assembly:GCA_002240575
  Clavibacter michiganensis subsp. michiganensis LMG 7333
• rRNA Operon Nucleotide:JN603280
  Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene, partial sequence.
• rRNA Operon Nucleotide:JN603282
  Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene, partial sequence.
• rRNA Operon Nucleotide:JN603283
  Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene, partial sequence.
• rRNA Operon Nucleotide:JN603284
  Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene, partial sequence.
• rRNA Operon Nucleotide:JN603285
  Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene, partial sequence.
• rRNA Operon Nucleotide:JN603286
  Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene, partial sequence.
• rRNA Operon Nucleotide:JN603287
  Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene, partial sequence.
• rRNA Operon Nucleotide:JN603288
  Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene, partial sequence.
• rRNA Operon Nucleotide:JN603292
  Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence.
• rRNA Operon Nucleotide:JN603294
  Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence.
• rRNA Operon Nucleotide:JN603295
  Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence.
• rRNA Operon Nucleotide:JN603296
  Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence.
• rRNA Operon Nucleotide:JN603297
  Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence.
• rRNA Operon Nucleotide:JN603298
  Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence.
• rRNA Operon Nucleotide:JN603299
  Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence.
• rRNA Operon Nucleotide:JN603300
  Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence.
• rRNA Operon Nucleotide:KX373388
  Clavibacter michiganensis subsp. michiganensis strain LMG 7333 16S ribosomal RNA gene, partial sequence
• rRNA Operon Nucleotide:FJ205139
  Clavibacter michiganensis subsp. michiganensis strain ICMP 2550 16S-23S ribosomal RNA intergenic spacer, partial sequence
• Gene Nucleotide:AM410876
  Clavibacter michiganensis subsp. michiganensis partial rpoB gene for RNA polymerase subunit B, type strain DSM 46364
• Gene Nucleotide:AM410850
  Clavibacter michiganensis subsp. michiganensis partial gyrB gene for DNA gyrase subunit B, type strain DSM 46364
• Gene Nucleotide:AM410798
  Clavibacter michiganensis subsp. michiganensis partial ppk gene for polyphosphatkinase, type strain DSM 46364
• Gene Nucleotide:AM410824
  Clavibacter michiganensis subsp. michiganensis partial recA gene for recombinase A, type strain DSM 46364
• rRNA Operon Nucleotide:AM410696
  Clavibacter michiganensis subsp. michiganensis partial 16S rRNA gene, type strain DSM 46364
• rRNA Operon Nucleotide:X77435
  C.michiganense (DSM 46364) 16S rRNA gene
• rRNA Operon Nucleotide:NR_115040
  Clavibacter michiganensis strain DSM 46364 16S ribosomal RNA, partial sequence
• Genome Assembly:GCA_900168345
  Clavibacter michiganensis VKM Ac-1403
• Gene Nucleotide:FJ971169
  Clavibacter michiganensis subsp. michiganensis strain CFBP 4999 molecular chaperone (groEL) gene, partial cds
• Genome Assembly:GCA_003697295
  Clavibacter michiganensis subsp. michiganensis CFBP 4999

Associated Publications (3)

• DOI: 10.1128/genomeA.00721-17
  Li XS, Yuan XK (2017). Genome Sequences for Multiple Clavibacter Strains from Different Subspecies.
• DOI: 10.1094/MPMI-08-18-0227-R
  Hwang IS, Oh EJ, Lee HB, Oh CS (2019). Functional Characterization of Two Cellulase Genes in the Gram-Positive Pathogenic Bacterium Clavibacter michiganensis for Wilting in Tomato.
• DOI: 10.3389/fmicb.2021.793345
  Oh EJ, Hwang IS, Park IW, Oh CS (2022). Comparative Genome Analyses of Clavibacter michiganensis Type Strain LMG7333(T) Reveal Distinct Gene Contents in Plasmids From Other Clavibacter Species.

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID386953.3

Retrieved 5 months ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:17366

Local history

• Registered 11 months ago
• Last modified 5 months ago