Strain sc|0017474

StrainInfo: SI-ID 41060 ^T

Taxon

Treponema denticola (not Gracilinema caldarium^T)

Sample

Human periodontal pocket (CA)

Cultures (6)

ATCC 35405 = CIP 103919 = ATCC 51460 = DSM 7334 = DSM 14222 = JCM 8153

Other Designations (1)

DSM 7334 strain ATCC 35405

Sequences (17)

• Gene Nucleotide:AF012922
  Treponema denticola methyl-accepting chemotaxis protein (mcpA) gene, complete cds
• Gene Nucleotide:AB059419
  Treponema denticola gyrA gene for DNA gyrase A, partial cds, strain:ATCC 35405
• Genome Assembly:GCA_000008185
  Treponema denticola ATCC 35405
• Gene Nucleotide:AF083949
  Treponema denticola DNA gyrase subunit B (gyrB) and chromosomal replication initiator protein (dnaA) genes, complete cds; and DNA polymerase (dnaE) gene, partial cds
• Gene Nucleotide:U84257
  Treponema denticola methyl-accepting chemotaxis protein B (dmcB) gene, partial cds
• Gene Nucleotide:U78776
  Treponema denticola gufa gene, partial cds, putative flagellar operon flgB, flgC, fliE, fliF, fliG, fliH, fliI and fliJ genes, complete cds, and fdgA gene, partial cds
• Gene Nucleotide:AF122909
  Treponema denticola Tap1 (tap1), flagellar hook assembly scaffolding protein FlgD (flgD), flagellar hook protein FlgE (flgE), flagellar motor protein MotA (motA), flagellar motor protein MotB (motB), FliL (fliL), flagellar switch protein FliM (fliM), flagellar switch protein FliY (fliY), and flagellar export protein FliP (fliP) genes, complete cds; and unknown genes
• Gene Nucleotide:AF042861
  Treponema denticola OppA (oppA), putative OppB (oppB), putative OppC (oppC), putative OppD (oppD), and putative OppF (oppF) genes, complete cds
• Gene Nucleotide:AF232219
  Treponema denticola putative alcohol dehydrogenase, FliQ (fliQ), FliR (fliR), and FlhB (flhB) genes, complete cds; and FlhA (flhA) gene, partial cds
• Gene Nucleotide:AY069957
  Treponema denticola protease complex-associated polypeptide precursor (prcA) gene, complete cds; and serine protease (prtP) gene, partial cds
• Gene Nucleotide:AY611605
  Treponema denticola Hpr kinase/phosphatase (hprK) gene, complete cds
• Gene Nucleotide:AJ277353
  Treponema denticola partial flaB2 gene for flagelline
• Gene Nucleotide:U29399
  Treponema denticola major outer sheath protein (msp) gene, complete cds
• rRNA Operon Nucleotide:AF139203
  Treponema denticola strain ATCC35405 16S ribosomal RNA gene, partial sequence
• rRNA Operon Nucleotide:EU580141
  Gracilinema caldarium DSM 7334 16S ribosomal RNA gene, partial sequence
• Genome Assembly:GCA_000219725
  Gracilinema caldarium DSM 7334
• rRNA Operon Nucleotide:AB621358
  Treponema denticola gene for 16S ribosomal RNA, partial sequence, strain: JCM 8153

Associated Publications (67)

• DOI: 10.1099/00207713-43-2-196
  Chan EC, Siboo R, Keng T, Psarra N, Hurley R, Cheng SL, Iugovaz I (1993). Treponema denticola (ex Brumpt 1925) sp. nov., nom. rev., and identification of new spirochete isolates from periodontal pockets.
• DOI: 10.1128/jb.179.4.1082-1089.1997
  Fenno JC, Wong GW, Hannam PM, Muller KH, Leung WK, McBride BC (1997). Conservation of msp, the gene encoding the major outer membrane protein of oral Treponema spp.
• DOI: 10.1128/jb.179.20.6441-6447.1997
  Walker SG, Ebersole JL, Holt SC (1997). Identification, isolation, and characterization of the 42-kilodalton major outer membrane protein (MompA) from Treponema pectinovorum ATCC 33768.
• DOI: 10.1128/iai.64.3.702-708.1996
  Makinen KK, Chen CY, Makinen PL (1996). Proline iminopeptidase from the outer cell envelope of the human oral spirochete Treponema denticola ATCC 35405.
• DOI: 10.1128/iai.65.10.4011-4016.1997
  Kataoka M, Li H, Arakawa S, Kuramitsu H (1997). Characterization of a methyl-accepting chemotaxis protein gene, dmcA, from the oral spirochete Treponema denticola.
• DOI: 10.1128/jb.178.12.3664-3667.1996
  Li H, Ruby J, Charon N, Kuramitsu H (1996). Gene inactivation in the oral spirochete Treponema denticola: construction of an flgE mutant.
• Makinen KK, Makinen PL, Syed SA (1992). Purification and substrate specificity of an endopeptidase from the human oral spirochete Treponema denticola ATCC 35405, active on furylacryloyl-Leu-Gly-Pro-Ala and bradykinin.
• DOI: 10.1128/iai.60.5.2058-2065.1992
  Haapasalo M, Muller KH, Uitto VJ, Leung WK, McBride BC (1992). Characterization, cloning, and binding properties of the major 53-kilodalton Treponema denticola surface antigen.
• DOI: 10.1128/iai.60.8.3360-3368.1992
  Baehni PC, Song M, McCulloch CA, Ellen RP (1992). Treponema denticola induces actin rearrangement and detachment of human gingival fibroblasts.
• DOI: 10.1128/iai.59.11.4230-4237.1991
  Haapasalo M, Singh U, McBride BC, Uitto VJ (1991). Sulfhydryl-dependent attachment of Treponema denticola to laminin and other proteins.
• DOI: 10.1128/iai.58.12.4099-4105.1990
  Que XC, Kuramitsu HK (1990). Isolation and characterization of the Treponema denticola prtA gene coding for chymotrypsinlike protease activity and detection of a closely linked gene encoding PZ-PLGPA-hydrolyzing activity.
• DOI: 10.1128/iai.56.10.2717-2722.1988
  Uitto VJ, Grenier D, Chan EC, McBride BC (1988). Isolation of a chymotrypsinlike enzyme from Treponema denticola.
• DOI: 10.1128/iai.62.11.4938-4947.1994
  Makinen PL, Makinen KK, Syed SA (1994). An endo-acting proline-specific oligopeptidase from Treponema denticola ATCC 35405: evidence of hydrolysis of human bioactive peptides.
• DOI: 10.1128/iai.63.4.1147-1152.1995
  Ishihara K, Kuramitsu HK (1995). Cloning and expression of a neutral phosphatase gene from Treponema denticola.
• DOI: 10.1016/0003-9969(95)98809-d
  De Filippo AB, Ellen RP, McCulloch CA (1995). Induction of cytoskeletal rearrangements and loss of volume regulation in epithelial cells by Treponema denticola.
• DOI: 10.1128/iai.63.9.3567-3575.1995
  Makinen PL, Makinen KK, Syed SA (1995). Role of the chymotrypsin-like membrane-associated proteinase from Treponema denticola ATCC 35405 in inactivation of bioactive peptides.
• DOI: 10.1016/0378-1119(95)00257-7
  Heinzerling HF, Penders JE, Burne RA (1995). Identification of a fliG homologue in Treponema denticola.
• DOI: 10.1111/j.1399-302x.1995.tb00131.x
  Chan EC, Qiu YS, Siboo R, Noble P (1995). Evidence for two distinct locomotory phenotypes of Treponema denticola ATCC 35405.
• DOI: 10.1006/abbi.1995.1092
  Makinen KK, Makinen PL, Loesche WJ, Syed SA (1995). Purification and general properties of an oligopeptidase from Treponema denticola ATCC 35405--a human oral spirochete.
• DOI: 10.1128/iai.62.8.3424-3433.1994
  Arakawa S, Kuramitsu HK (1994). Cloning and sequence analysis of a chymotrypsinlike protease from Treponema denticola.
• DOI: 10.1111/j.1600-0765.1994.tb01093.x
  Kokeguchi S, Miyamoto M, Kato K, Tanimoto I, Kurihara H, Murayama Y (1994). Isolation and characterization of a 53 kDa major cell envelope protein antigen from Treponema denticola ATCC 35405.
• DOI: 10.1016/0923-2508(93)90016-u
  Syed SA, Makinen KK, Makinen PL, Chen CY, Muhammad Z (1993). Proteolytic and oxidoreductase activity of Treponema denticola ATCC 35405 grown in an aerobic and anaerobic gaseous environment.
• DOI: 10.1128/jb.178.9.2489-2497.1996
  Fenno JC, Muller KH, McBride BC (1996). Sequence analysis, expression, and binding activity of recombinant major outer sheath protein (Msp) of Treponema denticola.
• DOI: 10.1128/iai.64.8.2904-2910.1996
  Mathers DA, Leung WK, Fenno JC, Hong Y, McBride BC (1996). The major surface protein complex of Treponema denticola depolarizes and induces ion channels in HeLa cell membranes.
• DOI: 10.1139/m96-137
  Scott D, Chan EC, Siboo R (1996). Iron acquisition by oral hemolytic spirochetes: isolation of a hemin-binding protein and identification of iron reductase activity.
• DOI: 10.1111/j.1399-302x.1996.tb00351.x
  Haapasalo M, Hannam P, McBride BC, Uitto VJ (1996). Hyaluronan, a possible ligand mediating Treponema denticola binding to periodontal tissue.
• DOI: 10.1128/iai.64.12.5178-5186.1996
  Ishihara K, Miura T, Kuramitsu HK, Okuda K (1996). Characterization of the Treponema denticola prtP gene encoding a prolyl-phenylalanine-specific protease (dentilisin).
• DOI: 10.1128/iai.65.2.685-691.1997
  Makinen PL, Makinen KK (1997). gamma-Glutamyltransferase from the outer cell envelope of Treponema denticola ATCC 35405.
• DOI: 10.1128/iai.65.6.2041-2051.1997
  Heinzerling HF, Olivares M, Burne RA (1997). Genetic and transcriptional analysis of flgB flagellar operon constituents in the oral spirochete Treponema denticola and their heterologous expression in enteric bacteria.
• DOI: 10.1111/j.1399-302x.1997.tb00628.x
  Scott D, Klitorinos A, Chan EC, Siboo R (1997). Visualization of an extracellular mucoid layer of Treponema denticola ATCC 35405 and surface sugar lectin analysis of some Treponema species.
• DOI: 10.1128/IAI.66.2.696-702.1998
  Yang PF, Song M, Grove DA, Ellen RP (1998). Filamentous actin disruption and diminished inositol phosphate response in gingival fibroblasts caused by Treponema denticola.
• DOI: 10.1111/j.1574-6968.1998.tb13047.x
  Fenno JC, Wong GW, Hannam PM, McBride BC (1998). Mutagenesis of outer membrane virulence determinants of the oral spirochete Treponema denticola.
• DOI: 10.1128/IAI.67.2.694-699.1999
  Li H, Arakawa S, Deng QD, Kuramitsu H (1999). Characterization of a novel methyl-accepting chemotaxis gene, dmcB, from the oral spirochete Treponema denticola.
• DOI: 10.1128/IAI.67.3.1220-1226.1999
  Battikhi T, Lee W, McCulloch CA, Ellen RP (1999). Treponema denticola outer membrane enhances the phagocytosis of collagen-coated beads by gingival fibroblasts.
• DOI: 10.1034/j.1399-302x.1999.140109.x
  Caldwell CE, Marquis RE (1999). Oxygen metabolism by Treponema denticola.
• DOI: 10.1111/j.1574-6968.1999.tb08703.x
  Stamm LV, Bergen HL (1999). Molecular characterization of a flagellar (fla) operon in the oral spirochete Treponema denticola ATCC 35405.
• DOI: 10.1128/IAI.68.4.1884-1892.2000
  Fenno JC, Tamura M, Hannam PM, Wong GW, Chan RA, McBride BC (2000). Identification of a Treponema denticola OppA homologue that binds host proteins present in the subgingival environment.
• Ellen RP, Ko KS, Lo CM, Grove DA, Ishihara K (2000). Insertional inactivation of the prtP gene of Treponema denticola confirms dentilisin's disruption of epithelial junctions.
• DOI: 10.1128/IAI.69.10.6276-6283.2001
  Lux R, Miller JN, Park NH, Shi W (2001). Motility and chemotaxis in tissue penetration of oral epithelial cell layers by Treponema denticola.
• DOI: 10.1034/j.1600-0765.2002.01007.x
  Leung WK, Wu Q, Hannam PM, McBride BC, Uitto VJ (2002). Treponema denticola may stimulate both epithelial proliferation and apoptosis through MAP kinase signal pathways.
• DOI: 10.1099/mic.0.26111-0
  Edwards AM, Dymock D, Woodward MJ, Jenkinson HF (2003). Genetic relatedness and phenotypic characteristics of Treponema associated with human periodontal tissues and ruminant foot disease.
• DOI: 10.1073/pnas.0307639101
  Seshadri R, Myers GS, Tettelin H, Eisen JA, Heidelberg JF, Dodson RJ, Davidsen TM, DeBoy RT, Fouts DE, Haft DH, Selengut J, Ren Q, Brinkac LM, Madupu R, Kolonay J, Durkin SA, Daugherty SC, Shetty J, Shvartsbeyn A, Gebregeorgis E, Geer K, Tsegaye G, Malek J, Ayodeji B, Shatsman S, McLeod MP, Smajs D, Howell JK, Pal S, Amin A, Vashisth P, McNeill TZ, Xiang Q, Sodergren E, Baca E, Weinstock GM, Norris SJ, Fraser CM, Paulsen IT (2004). Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes.
• DOI: 10.1099/mic.0.26816-0
  Vesey PM, Kuramitsu HK (2004). Genetic analysis of Treponema denticola ATCC 35405 biofilm formation.
• DOI: 10.1128/IAI.73.5.2891-2898.2005
  Edwards AM, Jenkinson HF, Woodward MJ, Dymock D (2005). Binding properties and adhesion-mediating regions of the major sheath protein of Treponema denticola ATCC 35405.
• DOI: 10.1016/j.micinf.2006.02.013
  Yamazaki T, Miyamoto M, Yamada S, Okuda K, Ishihara K (2006). Surface protease of Treponema denticola hydrolyzes C3 and influences function of polymorphonuclear leukocytes.
• DOI: 10.1111/j.1574-6968.2006.00589.x
  Capone RF, Ning Y, Pakulis N, Alhazzazi T, Fenno JC (2006). Characterization of Treponema denticola pyrF encoding orotidine-5'-monophosphate decarboxylase.
• DOI: 10.1016/j.micinf.2007.03.009
  Okuda T, Kimizuka R, Miyamoto M, Kato T, Yamada S, Okuda K, Ishihara K (2007). Treponema denticola induces interleukin-8 and macrophage chemoattractant protein 1 production in human umbilical vein epithelial cells.
• DOI: 10.1128/IAI.00258-07
  Bamford CV, Fenno JC, Jenkinson HF, Dymock D (2007). The chymotrypsin-like protease complex of Treponema denticola ATCC 35405 mediates fibrinogen adherence and degradation.
• DOI: 10.1111/j.1399-302X.2007.00404.x
  Capone R, Wang HT, Ning Y, Sweier DG, Lopatin DE, Fenno JC (2008). Human serum antibodies recognize Treponema denticola Msp and PrtP protease complex proteins.
• DOI: 10.1016/j.anaerobe.2010.03.009
  Kirschbaum M, Schultze-Mosgau S, Pfister W, Eick S (2010). Mixture of periodontopathogenic bacteria influences interaction with KB cells.
• DOI: 10.1111/omi.12013
  Goetting-Minesky MP, Godovikova V, Li JJ, Seshadrinathan S, Timm JC, Kamodia SS, Fenno JC (2012). Conservation and revised annotation of the Treponema denticola prcB-prcA-prtP locus encoding the dentilisin (CTLP) protease complex.
• DOI: 10.1128/AEM.00478-15
  Li Y, Ruby J, Wu H (2015). Kanamycin Resistance Cassette for Genetic Manipulation of Treponema denticola.
• DOI: 10.1128/AEM.01541-15
  Godovikova V, Goetting-Minesky MP, Shin JM, Kapila YL, Rickard AH, Fenno JC (2015). A Modified Shuttle Plasmid Facilitates Expression of a Flavin Mononucleotide-Based Fluorescent Protein in Treponema denticola ATCC 35405.
• DOI: 10.3389/fmicb.2016.00852
  Nimkulrat S, Lee H, Doak TG, Ye Y (2016). Genomic and Metagenomic Analysis of Diversity-Generating Retroelements Associated with Treponema denticola.
• DOI: 10.1186/s12903-016-0243-7
  Tanaka-Kumazawa K, Kikuchi Y, Sano-Kokubun Y, Shintani S, Yakushiji M, Kuramitsu HK, Ishihara K (2016). Characterization of a potential ABC-type bacteriocin exporter protein from Treponema denticola.
• DOI: 10.1111/omi.12185
  You M, Chan Y, Lacap-Bugler DC, Huo YB, Gao W, Leung WK, Watt RM (2017). Oral treponeme major surface protein: Sequence diversity and distributions within periodontal niches.
• DOI: 10.1080/20002297.2017.1339579
  Ong HS, Oettinger-Barak O, Dashper SG, Darby IB, Tan KH, Reynolds EC (2017). Effect of azithromycin on a red complex polymicrobial biofilm.
• DOI: 10.2209/tdcpublication.2017-0052
  Kikuchi Y, Kimizuka R, Kato T, Okuda K, Kokubu E, Ishihara K (2018). Treponema denticola Induces Epithelial Barrier Dysfunction in Polarized Epithelial Cells.
• DOI: 10.1128/JB.00528-18
  Godovikova V, Goetting-Minesky MP, Timm JC, Fenno JC (2018). Immunotopological Analysis of the Treponema denticola Major Surface Protein (Msp).
• DOI: 10.1080/20002297.2020.1829404
  Arai Y, Kikuchi Y, Okamoto-Shibayama K, Kokubu E, Shintani S, Ishihara K (2020). Investigation of the potential regulator proteins associated with the expression of major surface protein and dentilisin in Treponema denticola.
• DOI: 10.6026/97320630017192
  Babu G, Priya VV, Krishnaa PK, Gayathri R, Priyadharsini JV (2021). Identification of aspirin and diclofenac binding proteins in the red complex pathogens.
• DOI: 10.6026/97320630016759
  Faiz N, Pothapur KK, Vishnupriya V, Gayathri R, Priyadharsini JV (2020). Protein targets in the red complex organisms binding with an herbal compound silymarin.
• DOI: 10.6026/97320630016837
  Pothapur KK, Vishnu Priya V, Rengasamy G, Jayaseelan VP (2020). Identification of protein targets in red complex organisms binding with resveratrol.
• DOI: 10.1371/journal.pone.0270198
  Yokogawa T, Nagano K, Fujita M, Miyakawa H, Iijima M (2022). Characterization of a Treponema denticola ATCC 35405 mutant strain with mutation accumulation, including a lack of phage-derived genes.
• DOI: 10.3390/ijms241914886
  Kowalczyk P, Koszelewski D, Brodzka A, Kramkowski K, Ostaszewski R (2023). Evaluation of Antibacterial Activity against Nosocomial Pathogens of an Enzymatically Derived alpha-Aminophosphonates Possessing Coumarin Scaffold.
• DOI: 10.1111/jcpe.13892
  Tan J, Lamont GJ, Sekula M, Hong H, Sloan L, Scott DA (2023). The transcriptomic response to cannabidiol of Treponema denticola, a phytocannabinoid-resistant periodontal pathogen.
• DOI: 10.1099/ijsem.0.005690
  Gam ZBA, Thioye A, Cayol JL, Postec A, Bartoli-Joseph M, Vandecasteele C, Erauso G, Labat M (2023). Thermospira aquatica gen. nov., sp. nov., a novel thermophilic spirochete isolated from a Tunisian hot spring, and description of the novel family Thermospiraceae.

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID41060.3

Retrieved 5 months ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:17474

Local history

• Registered 11 months ago
• Last modified 5 months ago