Strain sc|0018869

StrainInfo: SI-ID 134242 ^T

Taxon

Mycobacterium abscessus subsp. massiliense (not Mycobacterium massiliense)

Sample

Human sputum and bronchial alveolar lavage, 50y.w (FR)

Cultures (5)

CCUG 48898 = CIP 108297 = KCTC 19086 = DSM 45103 = JCM 15300

Other Designations (2)

Timone LB = TIMONELB

Sequences (38)

• Gene Nucleotide:HQ324105
  Mycobacterium massiliense strain CCUG 48898 DNA gyrase B (gyrB) gene, partial cds
• Gene Nucleotide:AY596465
  Mycobacterium massiliense heat shock protein 65 (hsp65) gene, partial cds
• Gene Nucleotide:FJ442844
  Mycobacterium massiliense strain CCUG 48898 preprotein translocase SecA1 (secA1) gene, partial cds
• Gene Nucleotide:HQ324100
  Mycobacterium massiliense strain CCUG 48898 DNA gyrase A (gyrA) gene, partial cds
• Gene Nucleotide:GU131160
  Mycobacterium massiliense strain CCUG 48898 DNA gyrase A (gyrA) gene, partial cds
• Gene Nucleotide:AY593979
  Mycobacterium massiliense RecA (recA) gene, complete cds
• rRNA Operon Nucleotide:AM421292
  Mycobacterium massiliense ITS1, type strain CCUG48898T
• rRNA Operon Nucleotide:AY593980
  Mycobacterium abscessus subsp. bolletii strain CCUG 48898 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:AY593975
  Mycobacterium massiliense SodA (sodA) gene, partial cds
• rRNA Operon Nucleotide:AY593978
  Mycobacterium massiliense 16S-23S ribosomal RNA intergenic spacer, partial sequence
• Gene Nucleotide:AY593981
  Mycobacterium massiliense RpoB (rpoB) gene, complete cds
• rRNA Operon Nucleotide:GU143887
  Mycobacterium massiliense strain CCUG 48898 23S ribosomal RNA gene, complete sequence
• Gene Nucleotide:GU143885
  Mycobacterium massiliense strain CCUG 48898 DNA gyrase B (gyrB) gene, partial cds
• Gene Nucleotide:EU779953
  Mycobacterium massiliense strain CIP 108297 ribosomal protein L22 (rplV) gene, partial cds
• Gene Nucleotide:EF486339
  Mycobacterium massiliense strain CIP 108297 heat shock protein 65 (hsp65) gene, partial cds
• Gene Nucleotide:EU779956
  Mycobacterium massiliense strain CIP 108297 ribosomal protein L4 (rplD) gene, partial cds
• Gene Nucleotide:HM371393
  Mycobacterium massiliense bifunctional purine biosynthesis protein (purH) gene, partial cds
• Gene Nucleotide:EU191919
  Mycobacterium massiliense strain CIP 108297 65 kDa heat shock protein (hsp65) gene, partial cds
• Gene Nucleotide:HQ450848
  Mycobacterium massiliense strain CIP 108297 heat shock protein (groEL2) gene, partial cds
• rRNA Operon Nucleotide:EU109307
  Mycobacterium massiliense strain CIP 108297 23S ribosomal RNA gene, partial sequence
• Gene Nucleotide:EU191941
  Mycobacterium massiliense strain CIP 108297 elongation factor Tu (tuf) gene, partial cds
• Gene Nucleotide:JX041985
  Mycobacterium massiliense strain CIP 108297 RNA polymerase beta subunit (rpoB) gene, partial cds
• Gene Nucleotide:EU109294
  Mycobacterium massiliense strain CIP 108297 RNA polymerase subunit B gene, partial cds
• rRNA Operon Nucleotide:EU191912
  Mycobacterium massiliense strain CIP 108297 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:EU191937
  Mycobacterium massiliense strain CIP 108297 tmRNA (ssrA) gene, partial sequence
• Gene Nucleotide:HQ127368
  Mycobacterium massiliense strain CIP 108297 erythromycin ribosome methyltransferase Erm41-like (erm41) gene, promoter region and partial sequence
• Gene Nucleotide:EU266578
  Mycobacterium massiliense strain CIP 108297 65 kDa heat shock protein (hsp65) gene, partial cds
• Gene Nucleotide:EU254721
  Mycobacterium massiliense strain CIP 108297 RNA polymerase beta subunit (rpoB) gene, partial cds
• Gene Nucleotide:HM371392
  Mycobacterium massiliense phosphate acetyltransferase (pta) gene, partial cds
• Gene Nucleotide:EU191927
  Mycobacterium massiliense strain CIP 108297 smpB (smpB) gene, partial cds
• Gene Nucleotide:EU191921
  Mycobacterium massiliense strain CIP 108297 RNA polymerase (rpoB) gene, partial cds
• Gene Nucleotide:JX041978
  Mycobacterium massiliense strain CIP 108297 phoshoribosylaminoimiazolcarboxylase ATPase subunit (purH) gene, partial cds
• Gene Nucleotide:HM371391
  Mycobacterium massiliense phosphoglucomutase (pgmA) gene, partial cds
• Gene Nucleotide:FJ358487
  Mycobacterium massiliense strain KCTC 19086 Erm(42) gene, complete cds
• Gene Nucleotide:AB548601
  Mycobacterium abscessus subsp. bolletii hsp65 gene for heat shock protein 65, partial cds, strain: JCM 15300
• rRNA Operon Nucleotide:AB548603
  Mycobacterium abscessus subsp. bolletii DNA, 16S-23S ribosomal RNA intergenic spacer, partial sequence, strain: JCM 15300
• rRNA Operon Nucleotide:AB548602
  Mycobacterium abscessus subsp. bolletii gene for 16S ribosomal RNA, partial sequence, strain: JCM 15300
• Gene Nucleotide:AB548600
  Mycobacterium abscessus subsp. bolletii rpoB gene for RNA polymerase, partial cds, strain: JCM 15300

Associated Publications (8)

• DOI: 10.1128/JB.01200-12
  Tettelin H, Sampaio EP, Daugherty SC, Hine E, Riley DR, Sadzewicz L, Sengamalay N, Shefchek K, Su Q, Tallon LJ, Conville P, Olivier KN, Holland SM, Fraser CM, Zelazny AM (2012). Genomic insights into the emerging human pathogen Mycobacterium massiliense.
• DOI: 10.3389/fmicb.2018.00067
  Gupta RS, Lo B, Son J (2018). Phylogenomics and Comparative Genomic Studies Robustly Support Division of the Genus Mycobacterium into an Emended Genus Mycobacterium and Four Novel Genera.
• DOI: 10.1128/JCM.42.12.5493-5501.2004
  Adekambi T, Reynaud-Gaubert M, Greub G, Gevaudan MJ, La Scola B, Raoult D, Drancourt M (2004). Amoebal coculture of 'Mycobacterium massiliense' sp. nov. from the sputum of a patient with hemoptoic pneumonia.
• DOI: 10.1371/journal.pone.0024726
  Shang S, Gibbs S, Henao-Tamayo M, Shanley CA, McDonnell G, Duarte RS, Ordway DJ, Jackson M (2011). Increased virulence of an epidemic strain of Mycobacterium massiliense in mice.
• DOI: 10.1128/JCM.01274-10
  Macheras E, Roux AL, Bastian S, Leao SC, Palaci M, Sivadon-Tardy V, Gutierrez C, Richter E, Rusch-Gerdes S, Pfyffer G, Bodmer T, Cambau E, Gaillard JL, Heym B (2010). Multilocus sequence analysis and rpoB sequencing of Mycobacterium abscessus (sensu lato) strains.
• DOI: 10.1099/ijsem.0.001376
  Tortoli E, Kohl TA, Brown-Elliott BA, Trovato A, Leao SC, Garcia MJ, Vasireddy S, Turenne CY, Griffith DE, Philley JV, Baldan R, Campana S, Cariani L, Colombo C, Taccetti G, Teri A, Niemann S, Wallace RJ Jr, Cirillo DM (2016). Emended description of Mycobacterium abscessus, Mycobacterium abscessus subsp. abscessus and Mycobacteriumabscessus subsp. bolletii and designation of Mycobacteriumabscessus subsp. massiliense comb. nov.
• DOI: 10.1371/journal.pone.0081560
  Cho YJ, Yi H, Chun J, Cho SN, Daley CL, Koh WJ, Shin SJ (2013). The genome sequence of 'Mycobacterium massiliense' strain CIP 108297 suggests the independent taxonomic status of the Mycobacterium abscessus complex at the subspecies level.
• DOI: 10.1371/journal.pone.0114848
  Sekizuka T, Kai M, Nakanaga K, Nakata N, Kazumi Y, Maeda S, Makino M, Hoshino Y, Kuroda M (2014). Complete genome sequence and comparative genomic analysis of Mycobacterium massiliense JCM 15300 in the Mycobacterium abscessus group reveal a conserved genomic island MmGI-1 related to putative lipid metabolism.

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID134242.3

Retrieved 5 months ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:18869

Local history

• Registered 11 months ago
• Last modified 5 months ago