Strain sc|0019953

StrainInfo: SI-ID 2463 ^T

Taxon

Pectobacterium atrosepticum

Sample

Stem rot (GB)

Cultures (12)

LMG 2386 = ATCC 33260 = CECT 314 = ICMP 1526 = NCPPB 549 = PDDCC 1526 = CIP 105192 = CFBP 1526 = CCRC 13196 = BCRC 13196 = KACC 10477 = DSM 18077

Other Designations (10)

ICPB EA172 = G/39 = Graham G/39 = NZRCC 10223 = CNBP 1526 = LMG2386T QC 6/05 = Kelman A. SR55 = Dye ED3 = ICPB EA 155 = G39

Sequences (38)

• rRNA Operon Nucleotide:AF232687
  Pectobacterium carotovorum subsp. atrosepticum strain LMG 2386 16S-23S intergenic spacer region and tRNA-Glu gene, complete sequence
• Gene Nucleotide:AF234282
  Pectobacterium carotovorum subsp. atrosepticum tRNA-Ile and tRNA-Ala genes, complete sequence
• rRNA Operon Nucleotide:Z96090
  Pectobacterium atrosepticum 16S ribosomal RNA, strain LMG 2386
• Gene Nucleotide:JF311815
  Pectobacterium atrosepticum strain LMG 2386T RNA polymerase beta subunit (rpoB) gene, partial cds
• Gene Nucleotide:JN617657
  Pectobacterium atrosepticum strain LMG 2386 flagellin (fliC) gene, partial cds
• Gene Nucleotide:JF311702
  Pectobacterium atrosepticum strain LMG 2386T initiation translation factor 2 (infB) gene, partial cds
• Gene Nucleotide:JF311476
  Pectobacterium atrosepticum strain LMG 2386T ATP synthase beta subunit (atpD) gene, partial cds
• Gene Nucleotide:JF311589
  Pectobacterium atrosepticum strain LMG 2386T DNA gyrase (gyrB) gene, partial cds
• Gene Nucleotide:FJ895860
  Pectobacterium atrosepticum strain ATCC 33260 aconitate hydrase 1 (acnA) gene, partial cds
• Gene Nucleotide:FJ895861
  Pectobacterium atrosepticum strain ATCC 33260 glyceraldehyde-3-phosphate dehydrogenase (gapA) gene, partial cds
• Gene Nucleotide:FJ895864
  Pectobacterium atrosepticum strain ATCC 33260 glucose-6-phosphate isomerase (pgi) gene, partial cds
• Gene Nucleotide:FJ895863
  Pectobacterium atrosepticum strain ATCC 33260 malate dehydrogenase (mdh) gene, partial cds
• rRNA Operon Nucleotide:FJ595869
  Pectobacterium carotovorum subsp. carotovorum strain ATCC 33260 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:FJ895865
  Pectobacterium atrosepticum strain ATCC 33260 gamma-glutamylphosphate reductase (proA) gene, partial cds
• Gene Nucleotide:FJ895862
  Pectobacterium atrosepticum strain ATCC 33260 isocitrate dehydrogenase (icdA) gene, partial cds
• rRNA Operon Nucleotide:AJ555894
  Pectobacterium atrosepticum partial 16S rRNA gene, strain CECT 314
• Gene Nucleotide:DQ859796
  Pectobacterium atrosepticum strain ICMP 1526 ATP synthase beta subunit (atpD) gene, partial cds
• Gene Nucleotide:DQ859818
  Pectobacterium atrosepticum strain ICMP 1526 carbamoylphosphate synthetase small subunit (carA) gene, partial cds
• Gene Nucleotide:GQ144393
  Pectobacterium atrosepticum strain ICMP 1526 aconitase (acnA) gene, partial cds
• Gene Nucleotide:JQ771054
  Pectobacterium atrosepticum strain ICMP1526 coronafacic acid (cfa) biosynthetic gene cluster, complete sequence
• Gene Nucleotide:DQ859862
  Pectobacterium atrosepticum strain ICMP 1526 recombinase A (recA) gene, partial cds
• rRNA Operon Nucleotide:EF530555
  Pectobacterium atrosepticum strain ICMP 1526 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:GQ144373
  Pectobacterium atrosepticum strain ICMP 1526 malate dehydrogenase (mdh) gene, partial cds
• Gene Nucleotide:GQ144362
  Pectobacterium atrosepticum strain ICMP 1526 HecB (hecB) gene, partial cds
• Genome Assembly:GCA_001038685
  Pectobacterium atrosepticum ICMP 1526
• Gene Nucleotide:AY837548
  Pectobacterium atrosepticum strain NCPPB 549 60 kDa chaperonin (cpn60) gene, partial cds
• Genome Assembly:GCA_000749905
  Pectobacterium atrosepticum NCPPB 549
• Gene Nucleotide:JN600350
  Pectobacterium atrosepticum strain CFBP 1526 gamma-glutamylphosphate reductase (proA) gene, partial cds
• Gene Nucleotide:JN600336
  Pectobacterium atrosepticum strain CFBP 1526 glyceraldehyde-3-phosphate dehydrogenase A (gabA) gene, partial cds
• Gene Nucleotide:JN600353
  Pectobacterium atrosepticum strain CFBP 1526 RNA polymerase subunit sigma 38 (rpoS) gene, partial cds
• Gene Nucleotide:JN600347
  Pectobacterium atrosepticum strain CFBP 1526 glucose-6-phosphate isomerase (pgi) gene, partial cds
• Gene Nucleotide:JN600342
  Pectobacterium atrosepticum strain CFBP 1526 malate dehydrogenase (mdh) gene, partial cds
• rRNA Operon Nucleotide:JN600332
  Pectobacterium atrosepticum strain CFBP 1526 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:JN600333
  Pectobacterium atrosepticum strain CFBP 1526 aconitate hydrase 1 (acnA) gene, partial cds
• Gene Nucleotide:JN600339
  Pectobacterium atrosepticum strain CFBP 1526 isocitrate dehydrogenase (icdA) gene, partial cds
• Gene Nucleotide:JN600345
  Pectobacterium atrosepticum strain CFBP 1526 mannitol-1-phosphate 5-dehydrogenase (mtlD) gene, partial cds
• Genome Assembly:GCA_019056595
  Pectobacterium atrosepticum CFBP1526
• Gene Nucleotide:HF546063
  Pectobacterium atrosepticum yqhD gene for group III alcohol dehydrogenase, strain DSM 18077

Associated Publications (2)

• DOI: 10.1099/IJS.0.02423-0
  Gardan L, Christen R, Gouy C, Samson R (2003). Elevation of three subspecies of Pectobacterium carotovorum to species level: Pectobacterium atrosepticum sp. nov., Pectobacterium betavasculorum sp. nov. and Pectobacterium wasabiae sp. nov.
• DOI: 10.1016/S0723-2020(98)80048-9
  Hauben L, Verdonck L, Swings J, Moore ER, Steenackers M, Vauterin L, Mergaert J (1998). Phylogenetic Position of Phytopathogens within the Enterobacteriaceae

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID2463.2

Retrieved 12 days ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:19953

Local history

• Registered 26 days ago
• Last modified 12 days ago