Strain sc|0020615

StrainInfo: SI-ID 362266 ^T

Taxon

Novosphingobium subterraneum (not Novosphingobium subterraneae)

Sample

Subsurface core at 180 m depth (US)

Cultures (12)

LMG 18306 = ATCC 700279 = CIP 105153 = DSM 12447 = NCIMB 13466 = IFO16086 = KCTC 2889 = NBRC 16086 = BCRC 17177 = CCRC 17177 = CCUG 56444 = CCUG 56306

Other Designations (4)

SMCC BO478 = BO478 = SMCC B0478 = B0478

Sequences (14)

• rRNA Operon Nucleotide:GQ907178
  Novosphingobium subterraneum 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence
• Genome Assembly:GCA_000807925
  Novosphingobium subterraneum DSM 12447
• Gene Nucleotide:AB675151
  Novosphingobium subterraneum gene for 50S ribosomal protein L30, complete cds, strain: NBRC 16086T
• Gene Nucleotide:AB675146
  Novosphingobium subterraneum gene for 30S ribosomal protein S17, complete cds, strain: NBRC 16086T
• rRNA Operon Nucleotide:AB681046
  Novosphingobium subterraneum gene for 16S rRNA, partial sequence, strain: NBRC 16086
• Gene Nucleotide:AB675143
  Novosphingobium subterraneum gene for 30S ribosomal protein S19, complete cds, strain: NBRC 16086T
• Gene Nucleotide:AB675150
  Novosphingobium subterraneum gene for 50S ribosomal protein L18, complete cds, strain: NBRC 16086T
• Gene Nucleotide:AB675144
  Novosphingobium subterraneum gene for 50S ribosomal protein L22, complete cds, strain: NBRC 16086T
• Gene Nucleotide:AB675149
  Novosphingobium subterraneum gene for 30S ribosomal protein S08, complete cds, strain: NBRC 16086T
• Gene Nucleotide:AB675147
  Novosphingobium subterraneum gene for 50S ribosomal protein L24, complete cds, strain: NBRC 16086T
• Gene Nucleotide:AB675148
  Novosphingobium subterraneum gene for 30S ribosomal protein S14, complete cds, strain: NBRC 16086T
• Gene Nucleotide:AB675145
  Novosphingobium subterraneum gene for 50S ribosomal protein L29, complete cds, strain: NBRC 16086T
• Genome Assembly:GCA_001598575
  Novosphingobium subterraneum NBRC 16086
• rRNA Operon Nucleotide:LC752393
  Novosphingobium subterraneum NBRC 16086 gene for 16S rRNA, partial sequence.

Associated Publications (6)

• DOI: 10.7717/peerj.2332
  Gan HM, Dailey LK, Halliday N, Williams P, Hudson AO, Savka MA (2016). Genome sequencing-assisted identification and the first functional validation of N-acyl-homoserine-lactone synthases from the Sphingomonadaceae family.
• DOI: 10.1099/ijs.0.057273-0
  Xie F, Quan S, Liu D, He W, Wang Y, Ma H, Chen G, Chao Y, Qian S (2014). Novosphingobium kunmingense sp. nov., isolated from a phosphate mine.
• DOI: 10.1099/ijsem.0.001242
  Nguyen TM, Myung SW, Jang H, Kim J (2016). Description of Novosphingobiumflavum sp. nov., isolated from soil.
• DOI: 10.1099/ijsem.0.003384
  Xian WD, Li MM, Salam N, Ding YP, Zhou EM, Yin YR, Liu L, Xiao M, Li WJ (2019). Novosphingobium meiothermophilum sp. nov., isolated from a hot spring.
• DOI: 10.1099/ijsem.0.004628
  Chaudhary DK, Dahal RH, Kim DU, Kim J (2021). Novosphingobium olei sp. nov., with the ability to degrade diesel oil, isolated from oil-contaminated soil and proposal to reclassify Novosphingobium stygium as a later heterotypic synonym of Novosphingobium aromaticivorans.
• DOI: 10.1099/ijsem.0.006042
  Kang M, Van Le V, Ko SR, Lee SA, Choi DY, Oh HM, Ahn CY (2023). Novosphingobium cyanobacteriorum sp. nov., isolated from a eutrophic reservoir during the Microcystis bloom period.

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID362266.3

Retrieved 5 months ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:20615

Local history

• Registered 11 months ago
• Last modified 5 months ago