Strain sc|0021517

StrainInfo: SI-ID 4782 ^T

Taxon

Rhizobium leguminosarum (not Rhizobium pisi)

Sample

Haddock from fish market, skin (US)

Cultures (26)

LMG 11200 = ATCC 10004 = ATCC 10313 = CCRC 13517 = IAM 12609 = IFO 14778 = LMG 14904 = LMG 8817 = NCIMB 11478 = NCIB 11478 = CIP 106959 = VKM B-1964 = CECT 4113 = KCTC 1537 = NBRC 14778 = HAMBI 12 = BCRC 13517 = CCT 5087 = ICMP 13689 = KACC 10640 = JCM 20680 = CFBP 6721 = DSM 30132 = NCPPB 4139 = DSM 106839 = CCUG 56776

Other Designations (11)

USDA 2370 = 3H0q18 = CCTM La 3621 = Erdmann 3HOq18 = 2370 = DSMZ 30132 = Erdmann L.W., 3HOq18 = OUT 30008 = Erdman 3HOq18 = STM 237 = 3Hoq18

Sequences (34)

• Gene Nucleotide:Z79613
  Rhizobium leguminosarum 23S rRNA gene, strain ATCC 10004
• Gene Nucleotide:Y09784
  R.leguminosarum 23S rRNA gene, strain ATCC 10004, partial
• rRNA Operon Nucleotide:U29386
  Rhizobium leguminosarum bv. viciae 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:AJ251264
  Rhizobium leguminosarum partial 23S rRNA gene, strain ATCC 10004, (USDA 2370)
• Gene Nucleotide:AY752744
  Rhizobium leguminosarum strain ATCC 10004 DnaK gene, complete cds
• Genome Assembly:GCA_033842645
  Rhizobium leguminosarum ATCC 10004
• rRNA Operon Nucleotide:D14513
  Rhizobium leguminosarum gene for 16S rRNA, complete sequence, type strain: IAM 12609
• rRNA Operon Nucleotide:D12782
  Rhizobium leguminosarum gene for 16S rRNA, strain: IAM 12609
• Gene Nucleotide:AM418783
  Rhizobium leguminosarum partial atpD gene for ATP synthase beta subunit, strain LMG 14904
• Gene Nucleotide:AM295352
  Rhizobium leguminosarum partial rpoB gene for RNA polymerase beta subunit, strain LMG 14904
• Gene Nucleotide:AM182125
  Rhizobium leguminosarum partial recA gene for recombinase A, strain LMG 14904
• Gene Nucleotide:FM213290
  Rhizobium leguminosarum partial hrcA gene for heat-inducible transcription repressor, type strain LMG 14904T
• Gene Nucleotide:AM418830
  Rhizobium leguminosarum partial gyrB gene for DNA gyrase subunit beta, strain LMG 14904
• Gene Nucleotide:AM295436
  Rhizobium leguminosarum partial gap gene for glyceraldehyde 3-phosphate dehydrogenase, strain LMG 14904
• Gene Nucleotide:AM181690
  Rhizobium leguminosarum partial thrC gene for threonine synthase, strain LMG 14904
• Gene Nucleotide:FM213241
  Rhizobium leguminosarum partial ribonuclease P RNA (rnpB gene), type strain LMG 14904T
• Gene Nucleotide:AM295445
  Rhizobium leguminosarum partial pnp gene for polyribonucleotide nucleotidyltransferase, strain LMG 14904
• rRNA Operon Nucleotide:AM181757
  Rhizobium leguminosarum partial 16S rRNA gene, strain LMG 14904
• Gene Nucleotide:AM181616
  Rhizobium leguminosarum partial gltA gene for citrate synthase, strain LMG 14904
• rRNA Operon Nucleotide:AF345271
  Rhizobium leguminosarum strain LMG 14904 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA, partial sequence
• Gene Nucleotide:FM213144
  Rhizobium leguminosarum partial rpoD gene for RNA polymerase sigma factor, type strain LMG 14904T
• Gene Nucleotide:FM213193
  Rhizobium leguminosarum partial pal gene for peptidoglycan-associated lipoprotein, type strain LMG 14904T
• Gene Nucleotide:AM182081
  Rhizobium leguminosarum partial dnaK gene for molecular chaperone Hsp70, stain LMG 14904
• Gene Nucleotide:AM182939
  Rhizobium leguminosarum partial glnA gene for glutamine synthase, strain LMG 14904
• Genome Assembly:GCA_014191925
  Rhizobium pisi CECT 4113
• rRNA Operon Nucleotide:AB680659
  Rhizobium leguminosarum gene for 16S rRNA, partial sequence, strain: NBRC 14778
• rRNA Operon Nucleotide:AF091792
  Rhizobium leguminosarum strain CCT 5087T 16S-23S ribosomal DNA intergenic spacer region, 3' end
• rRNA Operon Nucleotide:AF091793
  Rhizobium leguminosarum strain CCT 5087T 16S-23S ribosomal DNA intergenic spacer region, 5' end
• rRNA Operon Nucleotide:DQ200174
  Rhizobium pisi strain DSM 30132 16S-23S ribosomal RNA intergenic spacer and 23S ribosomal RNA gene, partial sequence
• Gene Nucleotide:DQ431676
  Rhizobium pisi strain DSM 30132 RecA (recA) gene, partial cds
• Gene Nucleotide:DQ431673
  Rhizobium pisi strain DSM 30132 AtpD (atpD) gene, partial cds
• rRNA Operon Nucleotide:AY509899
  Rhizobium pisi strain DSM 30132 16S ribosomal RNA gene, partial sequence
• Genome Assembly:GCA_003938655
  Rhizobium pisi DSM 30132
• Genome Assembly:GCA_014202125
  Rhizobium leguminosarum DSM 106839

Associated Publications (7)

• DOI: 10.1128/aem.58.6.1809-1815.1992
  Eardly BD, Young JP, Selander RK (1992). Phylogenetic position of Rhizobium sp. strain Or 191, a symbiont of both Medicago sativa and Phaseolus vulgaris, based on partial sequences of the 16S rRNA and nifH genes.
• DOI: 10.1128/JB.184.12.3176-3185.2002
  Klein F, Samorski R, Klug G, Evguenieva-Hackenberg E (2002). Atypical processing in domain III of 23S rRNA of Rhizobium leguminosarum ATCC 10004(T) at a position homologous to an rRNA fragmentation site in protozoa.
• DOI: 10.1099/00207713-47-4-1097
  Sessitsch A, Ramirez-Saad H, Hardarson G, Akkermans AD, de Vos WM (1997). Classification of Austrian rhizobia and the Mexican isolate FL27 obtained from Phaseolus vulgaris L. as Rhizobium gallicum.
• DOI: 10.1099/ijs.0.006387-0
  Lin DX, Chen WF, Wang FQ, Hu D, Wang ET, Sui XH, Chen WX (2009). Rhizobium mesosinicum sp. nov., isolated from root nodules of three different legumes.
• DOI: 10.1007/s10482-018-1110-0
  Mathe I, Toth E, Mentes A, Szabo A, Marialigeti K, Schumann P, Felfoldi T (2018). A new Rhizobium species isolated from the water of a crater lake, description of Rhizobium aquaticum sp. nov.
• DOI: 10.3390/microorganisms11102385
  Romanenko L, Otstavnykh N, Tanaka N, Kurilenko V, Svetashev V, Tekutyeva L, Mikhailov V, Isaeva M (2023). Characterization and Genomic Analysis of Fererhizobium litorale gen. nov., sp. nov., Isolated from the Sandy Sediments of the Sea of Japan Seashore.
• DOI: 10.1016/j.syapm.2013.01.005
  Marek-Kozaczuk M, Leszcz A, Wielbo J, Wdowiak-Wrobel S, Skorupska A (2013). Rhizobium pisi sv. trifolii K3.22 harboring nod genes of the Rhizobium leguminosarum sv. trifolii cluster.

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID4782.3

Retrieved 5 months ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:21517

Local history

• Registered 11 months ago
• Last modified 5 months ago