Strain sc|0022986

StrainInfo: SI-ID 3561 ^T

Taxon

Methylobacterium organophilum^T

Sample

Lake sediment (US)

Cultures (18)

LMG 6083 = ATCC 27886 = DSM 760 = JCM 2833 = NCIB 11278 = CIP 101049 = CCRC 10934 = IFO 15689 = NCIMB 11278 = CCM 4460 = VKM B-2066 = NBRC 15689 = NCCB 78041 = LMD 78.41 = HAMBI 2263 = BCRC 10934 = DSM 18172 = CCUG 55902

Other Designations (7)

Hanson strain XX = FIRDI 934 = Urakami TK0047 = R.S. Hanson strain XX = T. Urakami TK 0047 = XX ATCC27886 = TK 0047

Sequences (13)

• rRNA Operon Nucleotide:AF338181
  Methylobacterium organophilum 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence
• rRNA Operon Nucleotide:AB175638
  Methylobacterium organophilum gene for 16S ribosomal RNA, partial sequence, strain:ATCC 27886
• Gene Nucleotide:M22629
  Methylobacterium organophilum methanol dehydrogenase (MDH) gene, complete cds; and unknown gene
• rRNA Operon Nucleotide:AB175637
  Methylobacterium radiotolerans gene for 16S ribosomal RNA, partial sequence, strain:DSM 760
• Gene Nucleotide:EU430420
  Methylobacterium organophilum gyrase subunit B (gyrB) gene, partial cds
• Gene Nucleotide:EF562471
  Methylobacterium organophilum strain DSM 760 methanol dehydrogenase alpha subunit-like (mxaF) gene, partial sequence
• rRNA Operon Nucleotide:D32226
  Methylobacterium organophilum gene for 16S rRNA, strain: JCM 2833
• Gene Nucleotide:AB302909
  Methylobacterium organophilum gyrB gene for gyrase B, partial cds, strain: JCM 2833
• rRNA Operon Nucleotide:AB175639
  Methylobacterium organophilum gene for 16S ribosomal RNA, partial sequence, strain:JCM 2833
• rRNA Operon Nucleotide:AJ400920
  Methylobacterium organophilum partial 16S rRNA gene, strain JCM 2833
• Gene Nucleotide:AB627074
  Methylobacterium organophilum cpn60 gene for 60 kDa chaperonin, partial cds, strain: NBRC 15689
• Genome Assembly:GCA_022179465
  Methylobacterium organophilum NBRC 15689
• rRNA Operon Nucleotide:LN681562
  Methylobacterium organophilum partial 16S rRNA gene, type strain DSM 18172T

Associated Publications (12)

• DOI: 10.1099/ijs.0.037713-0
  Tani A, Sahin N, Kimbara K (2011). Methylobacterium gnaphalii sp. nov., isolated from leaves of Gnaphalium spicatum.
• DOI: 10.1099/ijs.0.048215-0
  Tani A, Sahin N (2013). Methylobacterium haplocladii sp. nov. and Methylobacterium brachythecii sp. nov., isolated from bryophytes.
• DOI: 10.1099/ijs.0.060913-0
  Qu Z, Jiang F, Chang X, Qiu X, Ren L, Fang C, Peng F (2014). Psychroglaciecola arctica gen. nov., sp. nov., isolated from Arctic glacial foreland soil.
• DOI: 10.1128/jb.176.6.1746-1755.1994
  Morris CJ, Biville F, Turlin E, Lee E, Ellermann K, Fan WH, Ramamoorthi R, Springer AL, Lidstrom ME (1994). Isolation, phenotypic characterization, and complementation analysis of mutants of Methylobacterium extorquens AM1 unable to synthesize pyrroloquinoline quinone and sequences of pqqD, pqqG, and pqqC.
• DOI: 10.1099/00221287-143-2-595
  Toyama H, Chistoserdova L, Lidstrom ME (1997). Sequence analysis of pqq genes required for biosynthesis of pyrroloquinoline quinone in Methylobacterium extorquens AM1 and the purification of a biosynthetic intermediate.
• DOI: 10.3389/fmicb.2021.614957
  Volpiano CG, Sant'Anna FH, Ambrosini A, de Sao Jose JFB, Beneduzi A, Whitman WB, de Souza EM, Lisboa BB, Vargas LK, Passaglia LMP (2021). Genomic Metrics Applied to Rhizobiales (Hyphomicrobiales): Species Reclassification, Identification of Unauthentic Genomes and False Type Strains.
• DOI: 10.1099/00221287-134-9-2513
  Mazodier P, Biville F, Turlin E, Gasser F (1988). Localization of a pyrroloquinoline quinone biosynthesis gene near the methanol dehydrogenase structural gene in Methylobacterium organophilum DSM 760.
• DOI: 10.1007/s10482-019-01331-2
  Kim J, Chhetri G, Kim I, Kim MK, Seo T (2019). Methylobacterium durans sp. nov., a radiation-resistant bacterium isolated from gamma ray-irradiated soil.
• DOI: 10.1099/ijs.0.02540-0
  Ouattara AS, Assih EA, Thierry S, Cayol JL, Labat M, Monroy O, Macarie H (2003). Bosea minatitlanensis sp. nov., a strictly aerobic bacterium isolated from an anaerobic digester.
• DOI: 10.1099/ijs.0.64625-0
  Aslam Z, Lee CS, Kim KH, Im WT, Ten LN, Lee ST (2007). Methylobacterium jeotgali sp. nov., a non-pigmented, facultatively methylotrophic bacterium isolated from jeotgal, a traditional Korean fermented seafood.
• DOI: 10.1007/s12275-019-9007-9
  Kim J, Chhetri G, Kim I, Kim H, Kim MK, Seo T (2019). Methylobacterium terrae sp. nov., a radiation-resistant bacterium isolated from gamma ray-irradiated soil.
• DOI: 10.1099/ijsem.0.004054
  Kim J, Chhetri G, Kim I, Lee B, Jang W, Kim MK, Seo T (2020). Methylobacterium terricola sp. nov., a gamma radiation-resistant bacterium isolated from gamma ray-irradiated soil.

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID3561.3

Retrieved 5 months ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:22986

Local history

• Registered 11 months ago
• Last modified 5 months ago