Strain sc|0024867

StrainInfo: SI-ID 2148 ^T

Taxon

Flavobacterium johnsoniae (not Cytophaga johnsonae)

Sample

Soil or mud (GB)

Cultures (25)

LMG 1341 = ATCC 17061 = DSM 2064 = LMG 1340 = NCIB 11054 = CCUG 17935 = DSM 425 = NCIB 10150 = CCUG 35202 = NCIMB 11054 = CIP 100931 = CIP 101265 = IAM 14304 = IFO 14942 = JCM 7450 = NCIMB 10150 = JCM 8514 = VKM B-1399 = CECT 5015 = NBRC 14942 = NCCB 96103 = LMD 96.103 = CFBP 3036 = BCRC 14874 = CCRC 14874

Other Designations (13)

Reichenbach Cy j 3 = van Niel MYX 1.1.1 = C4 = NBRC 14942,strain ATCC 17061 = DSMZ 425 = HMSMYX.1.1.1 = GIFU 2500 = D.M. Webley = MYX 1.1.1 = Cy j3 = UW 101 = Reichenbach Cy j 1 = Cy j1

Sequences (28)

• rRNA Operon Nucleotide:AY753067
  Flavobacterium johnsoniae strain ATCC 17061 16S-23S ribosomal RNA intergenic spacer, partial sequence
• Gene Nucleotide:AY850226
  Flavobacterium johnsoniae Mdh (mdh) gene, partial cds; SecDF (secDF) gene, complete cds; and hypothetical protein (fjo28) gene, partial cds
• Gene Nucleotide:AF158372
  Flavobacterium johnsoniae hypothetical protein gene, partial cds; GldB (gldB), GldC (gldC), and hypothetical protein genes, complete cds; and hypothetical protein gene, partial cds
• Gene Nucleotide:EF111025
  Flavobacterium johnsoniae UW101 putative ABC transporter ATP binding subunit, SprE (sprE), and hypothetical protein genes, complete cds
• Genome Assembly:GCA_000016645
  Flavobacterium johnsoniae UW101
• Gene Nucleotide:AF169967
  Flavobacterium johnsoniae LeuS (leuS) gene, partial cds; and Fjo12 (fjo12), FtsX (ftsX), Fjo13 (fjo13), BacA (bacA), and TruB (truB) genes, complete cds
• Gene Nucleotide:AY850225
  Flavobacterium johnsoniae UW101 MaeB (maeB) gene, partial cds; RuvA (ruvA), SprA (sprA), GcvH (gcvH), and hypothetical protein (fjo27) genes, complete cds; and DeoC (deoC) gene, partial cds
• Gene Nucleotide:AF007381
  Flavobacterium johnsoniae gliding motility protein (gldA) gene, complete cds; and unknown genes
• Gene Nucleotide:EF111026
  Flavobacterium johnsoniae UW101 hypothetical protein gene, partial cds; and hypothetical protein, SprC (sprC), SprD (sprD), SprB (sprB), and hypothetical proteins genes, complete cds
• Gene Nucleotide:AY882986
  Flavobacterium johnsoniae Fjo29 (fjo29) gene, partial cds; GldK (gldK), GldL (gldL), GldM (gldM), GldN (gldN), and GldO (gldO) genes, complete cds; and Fjo30 (fjo30) gene, partial cds
• Gene Nucleotide:AY036615
  Flavobacterium johnsoniae Fjo14 (fjo14), Fjo15 (fjo15), gliding motility protein GldF (gldF), gliding motility protein GldG (gldG), and DNA polymerase III beta subunit DnaN (dnaN) genes, complete cds
• Genome Assembly:GCA_034479105
  Flavobacterium johnsoniae UW101 ATCC 17061
• Genome Assembly:GCA_002221975
  Flavobacterium johnsoniae UW101 ATCC 17061
• Gene Nucleotide:JX657172
  Flavobacterium johnsoniae strain DSM 2064 DNA-directed RNA polymerase subunit beta' (rpoC) gene, partial cds
• rRNA Operon Nucleotide:AM230489
  Flavobacterium johnsoniae partial 16S rRNA gene, type strain DSM 2064
• rRNA Operon Nucleotide:JX657050
  Flavobacterium johnsoniae strain DSM 2064 16S ribosomal RNA gene, partial sequence
• Genome Assembly:GCA_900142355
  Flavobacterium johnsoniae DSM 2064
• rRNA Operon Nucleotide:AF312000
  Flavobacterium johnsoniae a5 16S ribosomal RNA gene, partial sequence
• rRNA Operon Nucleotide:AM230488
  Flavobacterium sp. DSM 425 partial 16S rRNA gene, strain DSM 425
• rRNA Operon Nucleotide:AF312001
  Flavobacterium johnsoniae a6ag 16S ribosomal RNA gene, partial sequence
• rRNA Operon Nucleotide:AF312004
  Flavobacterium johnsoniae a38g 16S ribosomal RNA gene, partial sequence
• rRNA Operon Nucleotide:AF311999
  Flavobacterium johnsoniae a2b 16S ribosomal RNA gene, partial sequence
• rRNA Operon Nucleotide:AF312002
  Flavobacterium johnsoniae a20 16S ribosomal RNA gene, partial sequence
• rRNA Operon Nucleotide:AF312003
  Flavobacterium johnsoniae a27 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:AY028464
  Flavobacterium johnsoniae beta-lactamase JOHN-1 (blaJOHN-1), hypothetical primosomal replication factor Y, hypothetical pseudouridine synthase, and hypothetical transcription regulator protein genes, complete cds
• rRNA Operon Nucleotide:D12664
  Flavobacterium johnsoniae gene for 16S ribosomal RNA, partial sequence, strain: IFO 14942
• Gene Nucleotide:AB472806
  Flavobacterium johnsoniae tuf gene for elongation factor Tu, partial cds, strain: JCM 8514
• rRNA Operon Nucleotide:AB680715
  Flavobacterium johnsoniae gene for 16S rRNA, partial sequence, strain: NBRC 14942

Associated Publications (4)

• DOI: 10.1128/aem.52.6.1261-1265.1986
  Liao CH, Wells JM (1986). Properties of Cytophaga johnsonae strains causing spoilage of fresh produce at food markets.
• Lysenko AM, Bugaitsova ZhA, Ivanitsa VA (1995). [The level of DNA homology in species of the genus Cytophaga].
• DOI: 10.1271/bbb.120742
  Ojima T, Saburi W, Yamamoto T, Mori H, Matsui H (2013). Identification and characterization of cellobiose 2-epimerases from various aerobes.
• DOI: 10.1080/09168451.2016.1182852
  Gozu Y, Ishizaki Y, Hosoyama Y, Miyazaki T, Nishikawa A, Tonozuka T (2016). A glycoside hydrolase family 31 dextranase with high transglucosylation activity from Flavobacterium johnsoniae.

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID2148.3

Retrieved 22 days ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:24867

Local history

• Registered about 1 year ago
• Last modified 22 days ago