Strain sc|0026616

StrainInfo: SI-ID 2807 ^T

Taxon

Escherichia fergusonii

Sample

Feces of 1-year-old boy (US)

Cultures (12)

LMG 7866 = ATCC 35469 = CCUG 18766 = DSM 13698 = CIP 104947 = CIP 103357 = NCTC 12128 = BCRC 15582 = CCRC 15582 = IAM 14443 = NBRC 102419 = JCM 21226

Other Designations (2)

CDC 0568-73 = 568-73

Sequences (36)

• Gene Nucleotide:KF057933
  Escherichia fergusonii ATCC 35469 DNA-directed RNA polymerase beta-subunit (rpoB) gene, partial cds
• Gene Nucleotide:KF057904
  Escherichia fergusonii ATCC 35469 DNA-directed RNA polymerase alpha chain (rpoA) gene, partial cds
• Gene Nucleotide:U14462
  Escherichia fergusonii ATCC 35469 6-phosphogluconate dehydrogenase (gnd) gene, partial cds
• Gene Nucleotide:AY686536
  Escherichia fergusonii adenylsuccinate synthetase (purA) gene, partial cds
• Gene Nucleotide:AY132930
  Escherichia fergusonii strain ATCC 35469 sodium/proline symporter (putP) gene, partial cds
• Gene Nucleotide:U77437
  Escherichia fergusonii RNA polymerase beta-subunit (rpoB) gene, partial cds
• Gene Nucleotide:AF330594
  Escherichia fergusonii strain ATCC35469T proline permease (putP) gene, partial cds
• Gene Nucleotide:KF057889
  Escherichia fergusonii ATCC 35469 DNA repair protein (recN) gene, partial cds
• Gene Nucleotide:DQ386687
  Escherichia fergusonii strain ATCC 35469 gyrase B gene, partial cds
• Gene Nucleotide:AY370846
  Escherichia fergusonii strain ATCC 35469 gyrase B (gyrB) gene, partial cds
• Gene Nucleotide:AY686537
  Escherichia fergusonii RecA (recA) gene, partial cds
• Gene Nucleotide:AY686533
  Escherichia fergusonii adenylate kinase (adk) gene, partial cds
• Gene Nucleotide:AY132874
  Escherichia fergusonii strain ATCC 35469 p-aminobenzoate synthetase (pabB) gene, partial cds
• Genome Assembly:GCA_000026225
  Escherichia fergusonii ATCC 35469 ATCC 35469T
• Gene Nucleotide:KF057918
  Escherichia fergusonii ATCC 35469 putative tRNA modification GTPase (trmE) gene, partial cds
• Gene Nucleotide:AF330320
  Escherichia fergusonii strain ATCC35469T tryptophan synthase alpha subunit (trpA) gene, partial cds
• Gene Nucleotide:AY686538
  Escherichia fergusonii malate dehydrogenase (mdh) gene, partial cds
• Gene Nucleotide:AF330435
  Escherichia fergusonii strain ATCC35469T tryptophan synthase beta subunit (trpB) gene, partial cds
• Gene Nucleotide:AY132977
  Escherichia fergusonii strain ATCC 35469 tryptophan synthase subunit A (trpA) gene, partial cds
• Gene Nucleotide:AY686532
  Escherichia fergusonii methionyl tRNA synthetase gene, partial cds
• Gene Nucleotide:AY132905
  Escherichia fergusonii ATCC 35469 phosphoribosylaminoimidazole synthetase (purM) gene, partial cds
• Gene Nucleotide:AF330377
  Escherichia fergusonii strain ATCC35469T p-aminobenzoate synthetase (pabB) gene, partial cds
• Gene Nucleotide:AY746952
  Escherichia fergusonii ATCC 35469 LacZ (lacZ) gene, partial cds
• Gene Nucleotide:AY132995
  Escherichia fergusonii strain ATCC 35469 tryptophan synthase subunit B (trpB) gene, partial cds
• rRNA Operon Nucleotide:AF530475
  Escherichia fergusonii 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:AY686534
  Escherichia fergusonii isocitrate dehydrogenase (icd) gene, partial cds
• Gene Nucleotide:AY686535
  Escherichia fergusonii fumarase C (fumC) gene, partial cds
• Gene Nucleotide:U42435
  Escherichia fergusonii dGTP triphosphohydrolase (dgt) gene, complete cds
• Gene Nucleotide:AY132849
  Escherichia fergusonii strain ATCC 35469 isocitrate dehydrogenase (icd) gene, partial cds
• rRNA Operon Nucleotide:KP941767
  Escherichia fergusonii strain ATCC 35469 16S ribosomal RNA gene, partial sequence.
• rRNA Operon Nucleotide:MW019920
  Escherichia fergusonii strain ATCC 35469-1 16S ribosomal RNA gene, partial sequence
• rRNA Operon Nucleotide:MW019921
  Escherichia fergusonii strain ATCC 35469-2 16S ribosomal RNA gene, partial sequence
• rRNA Operon Nucleotide:MW019922
  Escherichia fergusonii strain ATCC 35469-3 16S ribosomal RNA gene, partial sequence
• rRNA Operon Nucleotide:MW019926
  Escherichia fergusonii strain ATCC 35469-4 16S ribosomal RNA gene, partial sequence
• Genome Assembly:GCA_900450565
  Escherichia fergusonii NCTC12128
• rRNA Operon Nucleotide:AB681775
  Escherichia fergusonii gene for 16S rRNA, partial sequence, strain: NBRC 102419

Associated Publications (9)

• DOI: 10.1128/jcm.21.1.77-81.1985
  Farmer JJ 3rd, Fanning GR, Davis BR, O'Hara CM, Riddle C, Hickman-Brenner FW, Asbury MA, Lowery VA 3rd, Brenner DJ (1985). Escherichia fergusonii and Enterobacter taylorae, two new species of Enterobacteriaceae isolated from clinical specimens.
• DOI: 10.3382/ps.2011-01738
  Forgetta V, Rempel H, Malouin F, Vaillancourt R Jr, Topp E, Dewar K, Diarra MS (2012). Pathogenic and multidrug-resistant Escherichia fergusonii from broiler chicken.
• DOI: 10.1021/jf5031168
  Tan S, Rupasinghe TW, Tull DL, Boughton B, Oliver C, McSweeny C, Gras SL, Augustin MA (2014). Degradation of curcuminoids by in vitro pure culture fermentation.
• DOI: 10.1099/ijs.0.000228
  Liu S, Jin D, Lan R, Wang Y, Meng Q, Dai H, Lu S, Hu S, Xu J (2015). Escherichia marmotae sp. nov., isolated from faeces of Marmota himalayana.
• DOI: 10.1016/j.mimet.2017.06.005
  Lindsey RL, Garcia-Toledo L, Fasulo D, Gladney LM, Strockbine N (2017). Multiplex polymerase chain reaction for identification of Escherichia coli, Escherichia albertii and Escherichia fergusonii.
• DOI: 10.1099/ijsem.0.004364
  Xu Z, Xia M, Huo YX, Yang Y (2020). Intestinirhabdus alba gen. nov., sp. nov., a novel genus of the family Enterobacteriaceae, isolated from the gut of plastic-eating larvae of the Coleoptera insect Zophobas atratus.
• DOI: 10.1016/j.crstbi.2022.06.001
  Beck IN, Picton DM, Blower TR (2022). Crystal structure of the BREX phage defence protein BrxA.
• DOI: 10.3390/nu15010206
  Lu M, Yang Y, Xu Y, Wang X, Li B, Le G, Xie Y (2023). Dietary Methionine Restriction Alleviates Choline-Induced Tri-Methylamine-N-Oxide (TMAO) Elevation by Manipulating Gut Microbiota in Mice.
• DOI: 10.3389/fmicb.2023.1245042
  Rawi MH, Tan HY, Sarbini SR (2023). Identification of acacia gum fermenting bacteria from pooled human feces using anaerobic enrichment culture.

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID2807.3

Retrieved 21 days ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:26616

Local history

• Registered about 1 year ago
• Last modified 21 days ago