Strain sc|0026985

StrainInfo: SI-ID 1256 ^T

Taxon

Bifidobacterium pseudocatenulatum

Sample

Infant, faeces

Cultures (16)

LMG 10505 = ATCC 27919 = CCUG 34989 = DSM 20438 = JCM 1200 = CIP 104168 = CCRC 15476 = KCTC 3223 = AS 1.2277 = CCM 7094 = CECT 5776 = HAMBI 562 = BCRC 15476 = NCAIM B.02022 = CGMCC 1.2277 = VTT E-991439

Other Designations (7)

CUETM 89-16 = CCTM 3069 = Scardovi B1279 = LMG 10505 t2T = LMG 10505QC3/01 = LMG 10505 t1T = B1279

Sequences (29)

• Gene Nucleotide:DQ234340
  Bifidobacterium pseudocatenulatum strain LMG 10505 DnaB (dnaB) gene, partial cds
• Gene Nucleotide:DQ198416
  Bifidobacterium pseudocatenulatum RpoC (rpoC) gene, partial cds
• Gene Nucleotide:DQ238032
  Bifidobacterium pseudocatenulatum strain LMG 10505 ClpC (clpC) gene, partial cds
• rRNA Operon Nucleotide:FJ231744
  Bifidobacterium pseudocatenulatum strain LMG10505 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence
• Gene Nucleotide:DQ234428
  Bifidobacterium pseudocatenulatum strain LMG 10505 PurF (purF) gene, partial cds
• Gene Nucleotide:AM181316
  Bifidobacterium pseudocatenulatum partial tet(W) gene for tetracycline resistance protein, type strain LMG 10505T
• Gene Nucleotide:DQ256118
  Bifidobacterium pseudocatenulatum DnaJ1 (dnaJ1) gene, partial cds
• Gene Nucleotide:DQ234380
  Bifidobacterium pseudocatenulatum strain LMG 10505 DnaG (dnaG) gene, partial cds
• rRNA Operon Nucleotide:GQ340897
  Bifidobacterium pseudocatenulatum DSM 20438 strain LMG 10505 23S ribosomal RNA gene, partial sequence
• Genome Assembly:GCA_000741685
  Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505
• rRNA Operon Nucleotide:M84785
  Bifidobacterium pseudocatenulatum (ATCC 27919) 16S ribosomal RNA gene, partial
• Gene Nucleotide:AF417535
  Bifidobacterium pseudocatenulatum strain ATCC 27919 transaldolase gene, partial cds
• Gene Nucleotide:AY377415
  Bifidobacterium pseudocatenulatum strain DSM 20438 putative xylulose 5-phosphate/fructose 6-phosphate phosphoketolase (xfp) gene, partial cds
• Genome Assembly:GCA_001025215
  Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505
• Genome Assembly:GCA_000173435
  Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505
• Genome Assembly:GCA_000771445
  Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505
• rRNA Operon Nucleotide:GQ227711
  Bifidobacterium pseudocatenulatum DSM 20438 strain JCM 1200 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:GQ452830
  Bifidobacterium pseudocatenulatum DSM 20438 strain JCM 1200 transaldolase gene, partial cds
• Gene Nucleotide:GQ302854
  Bifidobacterium pseudocatenulatum DSM 20438 strain JCM 1200 elongation factor Tu (tuf) gene, partial cds
• Gene Nucleotide:GQ261736
  Bifidobacterium pseudocatenulatum DSM 20438 strain JCM 1200 DnaK (dnaK) gene, partial cds
• Gene Nucleotide:AY642881
  Bifidobacterium pseudocatenulatum JCM 1200 GrpE (grpE) gene, partial cds
• Gene Nucleotide:AY585259
  Bifidobacterium pseudocatenulatum GroES gene, partial cds
• rRNA Operon Nucleotide:D86187
  Bifidobacterium pseudocatenulatum gene for 16S rRNA, partial sequence, strain: JCM 1200
• Gene Nucleotide:AY004274
  Bifidobacterium pseudocatenulatum heat shock protein 60 (hsp60) gene, partial cds
• rRNA Operon Nucleotide:AB507133
  Bifidobacterium pseudocatenulatum gene for 16S rRNA, partial sequence, strain: JCM 1200
• Gene Nucleotide:AY642865
  Bifidobacterium pseudocatenulatum JCM 1200 DnaK (dnaK) gene, partial cds
• Gene Nucleotide:GU361850
  Bifidobacterium pseudocatenulatum strain KCTC 3223 heat shock protein 60 (hsp60) gene, partial cds
• rRNA Operon Nucleotide:GU361827
  Bifidobacterium pseudocatenulatum strain KCTC 3223 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:EU780723
  Bifidobacterium pseudocatenulatum strain KCTC 3223 RNA polymerase beta subunit (rpoB) gene, partial cds

Associated Publications (5)

• DOI: 10.1016/j.ijfoodmicro.2009.07.015
  Haros M, Carlsson NG, Almgren A, Larsson-Alminger M, Sandberg AS, Andlid T (2009). Phytate degradation by human gut isolated Bifidobacterium pseudocatenulatum ATCC27919 and its probiotic potential.
• DOI: 10.1016/j.foodchem.2015.01.099
  Garcia-Mantrana I, Monedero V, Haros M (2015). Myo-inositol hexakisphosphate degradation by Bifidobacterium pseudocatenulatum ATCC 27919 improves mineral availability of high fibre rye-wheat sour bread.
• DOI: 10.3390/microorganisms11030758
  Hendricks SA, Vella CA, New DD, Aunjum A, Antush M, Geidl R, Andrews KR, Balemba OB (2023). High-Resolution Taxonomic Characterization Reveals Novel Human Microbial Strains with Potential as Risk Factors and Probiotics for Prediabetes and Type 2 Diabetes.
• DOI: 10.1016/j.ijbiomac.2023.127725
  Li S, Meng Y, Wang C, Suonan Z, Zhang X, Wu T, Dai Z, Zhang Y, Sharafeldin S, Zhang Y, Shen Q, Xue Y (2023). Effect of structural characteristics of resistant starch prepared by various methods on microbial community and fermentative products.
• DOI: 10.1016/j.jbiotec.2015.06.416
  Morita H, Toh H, Oshima K, Nakano A, Arakawa K, Takayama Y, Kurokawa R, Takanashi K, Honda K, Hattori M (2015). Complete genome sequence of Bifidobacterium pseudocatenulatum JCM 1200(T) isolated from infant feces.

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID1256.3

Retrieved 5 months ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:26985

Local history

• Registered 12 months ago
• Last modified 5 months ago