Strain sc|0027766

StrainInfo: SI-ID 6427 ^T

Taxon

Xenorhabdus nematophila^T

Sample

Nematode, intestinal lumen (US)

Cultures (13)

LMG 1036 = ATCC 19061 = CCUG 14189 = DSM 3370 = LMG 7801 = LMG 8289 = NCIB 9965 = NCIMB 9965 = CECT 4841 = CCRC 13945 = CCM 7081 = BCRC 13945 = CIP 108994

Other Designations (6)

Akhurst AN6 = CCEB 786 = CUETM 83-19 = strain DD-136 = G. O. Poinar, Jr. and G. M. Thomas = CUETM 8319

Sequences (24)

• Gene Nucleotide:AY363171
  Xenorhabdus nematophila putative UDP-glucose dehydrogenase (ugd) gene, partial cds; putative epimerase (nse), putative DNA-binding protein (hns), and thymidine kinase (tdk) genes, complete cds; adhE gene, complete sequence; truncated hypothetical protein (orfX), complete cds; and opp operon, complete sequence
• Gene Nucleotide:AF525419
  Xenorhabdus nematophila site-specific recombinase (mrxI) and YjiA (yjiA) genes, complete cds
• Gene Nucleotide:AY502024
  Xenorhabdus nematophila putative phosphoenolpyruvate-protein phosphotransferase (ptsP) gene, partial cds; and putative prolipoprotein diacylglyceryl transferase (lgt), thymidylate synthetase (thyA), and hypothetical proteins genes, complete cds
• Gene Nucleotide:EF123200
  Xenorhabdus nematophila IlvI (ilvI), IlvH (ilvH), and putative transcriptional regulator (XN_0_11629) genes, complete cds
• Gene Nucleotide:JN222361
  Xenorhabdus nematophila strain ATCC 19061 chitinase gene, complete cds
• Gene Nucleotide:AY077462
  Xenorhabdus nematophila strain ATCC 19061 phosphoserine aminotransferase (serC) and 3-phosphoshikimate 1-carboxyvinyltransferase (aroA) genes, complete cds
• Gene Nucleotide:AY556400
  Xenorhabdus nematophila strain ATCC 19061 NupX (nupX) gene, complete cds; and deo operon, complete sequence
• Gene Nucleotide:AY077463
  Xenorhabdus nematophila strain ATCC 19061 leucine-responsive regulatory protein (lrp) gene, complete cds
• Gene Nucleotide:AF198628
  Xenorhabdus nematophilus NlpD (nlpD) gene, partial cds; RpoS (rpoS) gene, complete cds; and MiaE (miaE) gene, partial cds
• Gene Nucleotide:AY640584
  Xenorhabdus nematophila Hcp (hcp), XhlB (xhlB), and XhlA (xhlA) genes, complete cds
• Gene Nucleotide:EF219019
  Xenorhabdus nematophila strain ATCC 19061 CpxP (cpxP), CpxR (cpxR), and CpxA (cpxA) genes, complete cds
• Gene Nucleotide:AY443349
  Xenorhabdus nematophila 2-isopropylmalate synthase (leuA) gene, partial cds; and 3-isopropylmalate dehydrogenase (leuB) gene, partial sequence
• Gene Nucleotide:AY077464
  Xenorhabdus nematophila strain ATCC 19061 RNA polymerase sigma E factor (rpoE) gene, complete cds
• Gene Nucleotide:AY561222
  Xenorhabdus nematophila putative DNA ligase gene, partial cds; and putative nucleoside transporter (nupC) and hypothetical proteins genes, complete cds
• Genome Assembly:GCA_000252955
  Xenorhabdus nematophila ATCC 19061
• Gene Nucleotide:EF221766
  Xenorhabdus nematophila strain ATCC 19061 FlhC (flhC) and FlhD (flhD) genes, complete cds
• Gene Nucleotide:EF221768
  Xenorhabdus nematophila strain ATCC 19061 FlgE (flgE) gene, complete cds
• Gene Nucleotide:EF123201
  Xenorhabdus nematophila XlpA (xlpA) gene, complete cds
• Gene Nucleotide:EF221767
  Xenorhabdus nematophila strain ATCC 19061 FliZ (fliZ), FliA (fliA), FliC (fliC), putative flagellar capping protein, FliS (fliS), and FliT (fliT) genes, complete cds
• rRNA Operon Nucleotide:D78009
  Xenorhabdus nematophila gene for 16S rRNA, partial sequence, strain: ATCC 19061
• Genome Assembly:GCA_963861685
  Xenorhabdus nematophila ATCC 19061 ena-yuan-GCF_000252955.1
• rRNA Operon Nucleotide:FJ515824
  Xenorhabdus nematophila strain ATCC 19061 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence
• rRNA Operon Nucleotide:AY278674
  Xenorhabdus nematophila 16S ribosomal RNA gene, partial sequence
• rRNA Operon Nucleotide:X82251
  X.nematophilus 16S rRNA gene (DSM 3370)

Associated Publications (7)

• DOI: 10.1128/aem.57.4.1173-1180.1991
  Xu J, Olson ME, Kahn ML, Hurlbert RE (1991). Characterization of Tn5-Induced Mutants of Xenorhabdus nematophilus ATCC 19061.
• DOI: 10.2174/0929866526666190327143335
  Liu J, Song P, Zhang J, Nangong Z, Liu X, Gao Y, Wang Q (2019). Characteristics and Function of the Chitin Binding Protein from Xenorhabdus nematophila.
• DOI: 10.1371/journal.pone.0027909
  Chaston JM, Suen G, Tucker SL, Andersen AW, Bhasin A, Bode E, Bode HB, Brachmann AO, Cowles CE, Cowles KN, Darby C, de Leon L, Drace K, Du Z, Givaudan A, Herbert Tran EE, Jewell KA, Knack JJ, Krasomil-Osterfeld KC, Kukor R, Lanois A, Latreille P, Leimgruber NK, Lipke CM, Liu R, Lu X, Martens EC, Marri PR, Medigue C, Menard ML, Miller NM, Morales-Soto N, Norton S, Ogier JC, Orchard SS, Park D, Park Y, Qurollo BA, Sugar DR, Richards GR, Rouy Z, Slominski B, Slominski K, Snyder H, Tjaden BC, van der Hoeven R, Welch RD, Wheeler C, Xiang B, Barbazuk B, Gaudriault S, Goodner B, Slater SC, Forst S, Goldman BS, Goodrich-Blair H (2011). The entomopathogenic bacterial endosymbionts Xenorhabdus and Photorhabdus: convergent lifestyles from divergent genomes.
• DOI: 10.1016/j.compbiolchem.2018.07.010
  Yadav M, Rathore JS (2018). TAome analysis of type-II toxin-antitoxin system from Xenorhabdus nematophila.
• DOI: 10.1016/j.ijbiomac.2020.05.078
  Mahmood S, Kumar M, Kumari P, Mahapatro GK, Banerjee N, Sarin NB (2020). Novel insecticidal chitinase from the insect pathogen Xenorhabdus nematophila.
• DOI: 10.1016/j.micpath.2021.105309
  Yadav M, Rathore JS (2021). Functional and transcriptional analysis of chromosomal encoded hipBA(Xn2) type II toxin-antitoxin (TA) module from Xenorhabdus nematophila.
• DOI: 10.1021/acschembio.3c00782
  Phan CS, Chang L, Nguyen TQN, Suarez AFL, Ho XH, Chen H, Koh IYF, Morinaka BI (2024). Substrate Promiscuity of the Triceptide Maturase XncB Leads to Incorporation of Various Amino Acids and Detection of Oxygenated Products.

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID6427.3

Retrieved 5 months ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:27766

Local history

• Registered 11 months ago
• Last modified 5 months ago