Strain sc|0029113

StrainInfo: SI-ID 92494 ^T

Taxon

Aeromonas salmonicida subsp. smithia

Sample

Ulcer (GB)

Cultures (11)

LMG 16264 = CCM 4103 = LMG 10893 = ATCC 49393 = NCIMB 13210 = LMG 20223 = CIP 104757 = CECT 5179 = BCRC 15864 = CCRC 15864 = DSM 21293

Other Designations (7)

CCM 4103 138 = B. Austin 138 = T. Owen AS20/1/1 = Austin 138 = Owen AS20/1/1 = 138 = AS20/1/1

Sequences (33)

• rRNA Operon Nucleotide:AJ009859
  Aeromonas salmonicida subsp. smithia 16S rRNA gene, partial
• Gene Nucleotide:FJ178218
  Aeromonas salmonicida subsp. smithia strain ATCC 49393 sulfite reductase [NADPH] flavoprotein alpha-component (cysJ) gene, partial cds
• Gene Nucleotide:AB033453
  Aeromonas salmonicida sodB gene for iron-cofactored superoxide dismutase, partial cds, strain:ATCC49393T
• Gene Nucleotide:FJ178288
  Aeromonas salmonicida subsp. smithia strain ATCC 49393 elastase (ahpB) gene, partial cds
• Gene Nucleotide:FJ178296
  Aeromonas salmonicida subsp. smithia strain ATCC 49393 putative T3SS effector AopX (aopX) gene, partial cds
• Gene Nucleotide:FJ178270
  Aeromonas salmonicida subsp. smithia strain ATCC 49393 flp pilus assembly protein FlpB (flpB) gene, partial cds
• Gene Nucleotide:FJ178250
  Aeromonas salmonicida subsp. smithia strain ATCC 49393 toxic extracellular endopeptidase (asaP1) pseudogene, partial sequence
• Gene Nucleotide:FJ178257
  Aeromonas salmonicida subsp. smithia strain ATCC 49393 flp pilus assembly protein FlpI (flpI) gene, partial cds
• Gene Nucleotide:FJ178200
  Aeromonas salmonicida subsp. smithia strain ATCC 49393 type IV pilus assembly protein (tapC) pseudogene, partial sequence
• Gene Nucleotide:FJ178194
  Aeromonas salmonicida subsp. smithia strain ATCC 49393 beta galactosidase (lacZ) gene, partial cds
• Gene Nucleotide:FJ178276
  Aeromonas salmonicida subsp. smithia strain ATCC 49393 catabolic acetolactate synthase (ilvB) gene, partial cds
• Gene Nucleotide:FJ178233
  Aeromonas salmonicida subsp. smithia strain ATCC 49393 GGDEF domain protein gene, partial cds
• Gene Nucleotide:FJ178282
  Aeromonas salmonicida subsp. smithia strain ATCC 49393 luxR family response regulator pseudogene, partial sequence
• Gene Nucleotide:FJ178240
  Aeromonas salmonicida subsp. smithia strain ATCC 49393 predicted Fe-S-cluster redox enzyme and pilus assembly protein TapF (tapF) genes, partial cds
• Gene Nucleotide:FJ178212
  Aeromonas salmonicida subsp. smithia strain ATCC 49393 polysaccharide deacetylase gene, partial cds
• rRNA Operon Nucleotide:AB027544
  Aeromonas salmonicida subsp. smithia gene for 16S rRNA, strain: ATCC 49393
• Gene Nucleotide:FJ178263
  Aeromonas salmonicida subsp. smithia strain ATCC 49393 flp pilus assembly protein FlpF (flpF) and flp pilus assembly protein FlpG (flpG) genes, partial cds
• rRNA Operon Nucleotide:EF373993
  Aeromonas salmonicida clone 1 16S ribosomal RNA gene, partial sequence; and 16S-23S ribosomal RNA intergenic spacer, complete sequence
• Gene Nucleotide:FJ178227
  Aeromonas salmonicida subsp. smithia strain ATCC 49393 class II fumarate hydratase (fumC) gene, partial cds
• Gene Nucleotide:AM262159
  Aeromonas salmonicida subsp. smithia partial gyrB gene for DNA gyrase subunit B, type strain NCIMB 13210T
• Gene Nucleotide:JN830096
  Aeromonas salmonicida subsp. smithia strain CIP 104757 elongation factor Ts (tsf) gene, partial cds
• Gene Nucleotide:JN711858
  Aeromonas salmonicida subsp. smithia strain CIP 104757 DNA gyrase subunit beta (gyrB) gene, partial cds
• Gene Nucleotide:JN660400
  Aeromonas salmonicida subsp. smithia strain CIP 104757 recombinase A (recA) gene, complete cds
• Gene Nucleotide:JN829319
  Aeromonas salmonicida subsp. smithia strain CIP 104757 citrate synthase (gltA) gene, partial cds
• Gene Nucleotide:JN829125
  Aeromonas salmonicida subsp. smithia strain CIP 104757 70 kDa heat shock protein (dnaK) gene, partial cds
• Gene Nucleotide:JN829901
  Aeromonas salmonicida subsp. smithia strain CIP 104757 RNA polymerase beta subunit (rpoB) gene, partial cds
• Gene Nucleotide:JN711731
  Aeromonas salmonicida subsp. smithia strain CIP 104757 DnaJ (dnaJ) gene, partial cds
• Gene Nucleotide:JN830291
  Aeromonas salmonicida subsp. smithia strain CIP 104757 cell division protein ZipA (zipA) gene, partial cds
• Gene Nucleotide:JN829514
  Aeromonas salmonicida subsp. smithia strain CIP 104757 DNA gyrase beta subuni (gyrB) gene, partial cds
• Gene Nucleotide:JN712433
  Aeromonas salmonicida subsp. smithia strain CIP 104757 RNA polymerase sigma-70 factor (rpoD) gene, partial cds
• Gene Nucleotide:JN829709
  Aeromonas salmonicida subsp. smithia strain CIP 104757 DNA repair protein RadA (radA) gene, partial cds
• Gene Nucleotide:EU306829
  Aeromonas salmonicida subsp. smithia strain CIP 104757 60 kDa chaperonin (cpn60) gene, partial cds
• Gene Nucleotide:HM163318
  Aeromonas salmonicida subsp. smithia strain CECT 5179 malate dehydrogenase (mdh) gene, complete cds

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID92494.2

Retrieved 5 months ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:29113

Local history

• Registered 11 months ago
• Last modified 5 months ago