Strain sc|0029203

StrainInfo: SI-ID 4542 ^T

Taxon

Pseudomonas syringae (not Pseudomonas syringae subsp. syringae)

Sample

Syringa vulgaris (HU)

Cultures (21)

LMG 1247 = ATCC 19310 = CCUG 14279 = ICMP 3023 = NCPPB 281 = PDDCC 3023 = CIP 106698 = DSM 10604 = IMI 347448 = CFBP 1392 = CECT 4429 = NCAIM B.01398 = NRRL B-1631 = NCCB 69035 = LMD 69.35 = ICMP 4900 = KCTC 12500 = KACC 10134 = CFBP 4364 = CFBP 4702 = VTT E-991289

Other Designations (26)

Dye P191 = ICPB PS255 = CCEB 760 = PWP 60 = CNBP 1392 = R-17324 = PD 184 = DEB-8829 = NCBPP 281 = DEB-8825 = DEB-5906 = BPIC 1466 = NZRCC 10307 = LMG1247T QC 5/03 = DEB-7286 = ICPB S255 = DEB-4529 = PD 1704 = IMI B00031 = DEB-7703 = DEB-2983 = DEB-7327 = LMG1247T QC 10/06 = DSM 6693 = ICMP 3023A = Gardan L. 11200

Sequences (32)

• rRNA Operon Nucleotide:HM032083
  Pseudomonas syringae pv. syringae culture-collection LMG:1247 16S-23S ribosomal RNA intergenic spacer, partial sequence
• rRNA Operon Nucleotide:HM032084
  Pseudomonas syringae pv. syringae culture-collection LMG:1247 16S-23S ribosomal RNA intergenic spacer, partial sequence
• Gene Nucleotide:AJ717484
  Pseudomonas syringae partial rpoB gene for DNA-directed RNA polymerase beta chain, strain LMG 1247T
• Gene Nucleotide:JF901554
  Pseudomonas syringae strain LMG 1247 peptidoglycan-associated lipoprotein OprL (oprL) gene, partial cds
• Gene Nucleotide:JF901463
  Pseudomonas syringae strain LMG 1247 major outer membrane lipoprotein I (oprI) gene, partial cds
• Gene Nucleotide:AF115335
  Pseudomonas syringae pv. syringae ECF sigma factor SigX (sigX) gene, complete cds
• rRNA Operon Nucleotide:HM032080
  Pseudomonas syringae pv. syringae culture-collection LMG:1247 16S-23S ribosomal RNA intergenic spacer, partial sequence
• rRNA Operon Nucleotide:AJ308316
  Pseudomonas syringae partial 16S rRNA gene, type strain ICMP 3023T
• Gene Nucleotide:AJ414228
  Pseudomonas syringae partial carA gene for carbamoylphosphate synthetase small subunit
• rRNA Operon Nucleotide:AF094749
  Pseudomonas syringae strain ATCC 19310 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:AY457036
  Pseudomonas syringae strain ATCC 19310 type III secretion system protein (hrcN) gene, partial cds
• Gene Nucleotide:AJ316163
  Pseudomonas syringae partial recA gene, strain ICMP 3023
• Gene Nucleotide:AJ414249
  Pseudomonas syringae partial atpD gene for atpD beta synthase chain
• rRNA Operon Nucleotide:D84026
  Pseudomonas syringae 16S rRNA gene
• Gene Nucleotide:FN554759
  Pseudomonas syringae partial rpoB gene for DNA-directed RNA polymerase beta-subunit, type strain ATCC 19310T
• rRNA Operon Nucleotide:FJ971872
  Pseudomonas syringae strain ATCC 19310 16S ribosomal RNA gene, partial sequence
• rRNA Operon Nucleotide:AF311988
  Pseudomonas syringae a41 16S ribosomal RNA gene, partial sequence
• rRNA Operon Nucleotide:AF311989
  Pseudomonas syringae axB12 16S ribosomal RNA gene, partial sequence
• rRNA Operon Nucleotide:HM190217
  Pseudomonas syringae pv. syringae culture-collection ICMP:3023 16S ribosomal RNA gene, partial sequence
• Genome Assembly:GCA_001401075
  Pseudomonas syringae pv. syringae ICMP 3023
• Gene Nucleotide:AY837544
  Pseudomonas syringae pv. syringae strain NCPPB 281 60 kDa chaperonin (cpn60) gene, partial cds
• rRNA Operon Nucleotide:DQ318866
  Pseudomonas syringae pv. syringae strain NCPPB 281 16S ribosomal RNA gene, partial sequence
• rRNA Operon Nucleotide:LN849855
  Pseudomonas syringae pv. syringae partial 16S rRNA gene, strain NCPPB 281
• Gene Nucleotide:FN433217
  Pseudomonas syringae partial rpoD gene for RNA polymerase sigma factor, strain PDDCC 3023
• Gene Nucleotide:AB039516
  Pseudomonas syringae rpoD gene for DNA-directed RNA polymerase subunit D, partial cds, strain: PDDCC 3023
• Gene Nucleotide:AB039428
  Pseudomonas syringae gyrB gene for DNA gyrase subunit B, partial cds, strain: PDDCC 3023
• Genome Assembly:GCA_000597765
  Pseudomonas syringae DSM 10604
• Gene Nucleotide:HE604370
  Pseudomonas syringae pv. syringae partial gltA gene for Type II citrate synthase, strain CFBP 1392
• Gene Nucleotide:HE604385
  Pseudomonas syringae pv. syringae partial gyrB gene for DNA gyrase subunit B, strain CFBP 1392
• Gene Nucleotide:HE604400
  Pseudomonas syringae pv. syringae partial rpoD gene for RNA polymerase sigma factor, strain CFBP 1392
• rRNA Operon Nucleotide:AY342181
  Pseudomonas syringae pv. syringae strain NRRL B-1631 16S-23S ribosomal RNA intergenic spacer, partial sequence
• Genome Assembly:GCA_000507185
  Pseudomonas syringae KCTC 12500

Associated Publications (6)

• DOI: 10.1128/jb.168.2.607-612.1986
  Perry KL, Simonitch TA, Harrison-Lavoie KJ, Liu ST (1986). Cloning and regulation of Erwinia herbicola pigment genes.
• DOI: 10.4014/jmb.1312.12082
  Park YS, Jeong H, Sim YM, Yi HS, Ryu CM (2014). Genome sequence and comparative genome analysis of Pseudomonas syringae pv. syringae type strain ATCC 19310.
• DOI: 10.3390/plants12040795
  Chiocchio I, Mandrone M, Tacchini M, Guerrini A, Poli F (2023). Phytochemical Profile and In Vitro Bioactivities of Plant-Based By-Products in View of a Potential Reuse and Valorization.
• DOI: 10.1128/jb.173.2.768-775.1991
  Ullstrom CA, Siehnel R, Woodruff W, Steinbach S, Hancock RE (1991). Conservation of the gene for outer membrane protein OprF in the family Pseudomonadaceae: sequence of the Pseudomonas syringae oprF gene.
• DOI: 10.1007/s10126-008-9108-7
  Xu Y, Liu Q, Zhou L, Yang Z, Zhang Y (2008). Surface display of GFP by Pseudomonas syringae truncated ice nucleation protein in attenuated Vibrio anguillarum strain.
• DOI: 10.1128/aem.63.2.498-505.1997
  Manceau C, Horvais A (1997). Assessment of genetic diversity among strains of Pseudomonas syringae by PCR-restriction fragment length polymorphism analysis of rRNA operons with special emphasis on P. syringae pv. tomato.

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID4542.3

Retrieved 27 days ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:29203

Local history

• Registered about 1 year ago
• Last modified 27 days ago