Strain sc|0029520

StrainInfo: SI-ID 1750 ^T

Taxon

Citrobacter freundii^T

Sample

Distillery sour grain mash incubated at 45A?C (ZW)

Cultures (35)

LMG 3246 = ATCC 13316 = ATCC 8090 = CCUG 418 = CECT 401 = DSM 30039 = IFO 12681 = LMG 3247 = NCIB 11490 = NCTC 9750 = JCM 1657 = NCIMB 11490 = CIP 57.32 = CCRC 10637 = CCRC 12291 = KCTC 2509 = NBRC 12681 = NRRL B-2643 = NCCB 92011 = LMD 92.11 = HAMBI 1695 = NCAIM B.01468 = BCRC 12291 = CCT 0522 = CCT 1355 = CCT 1442 = IAM 12471 = ICMP 7610 = NBIMCC 3731 = CDBB 955 = ACM 2197 = ACM 2458 = ICMP 15657 = CFBP 6647 = VTT E-97778

Other Designations (10)

FIRDI 637 = NZRCC 10474 = NZRM 982 = NHI 982 = CCTM La 3575 = DSMZ 30039 = NCIP 11490 = AJ 2619 = Br = MTCC 1658

Sequences (47)

• Gene Nucleotide:JX425089
  Citrobacter freundii strain LMG 3246 DNA gyrase (gyrB) gene, partial cds
• Gene Nucleotide:JX424960
  Citrobacter freundii strain LMG 3246 ATP synthase beta subunit (atpD) gene, partial cds
• Gene Nucleotide:JX425219
  Citrobacter freundii strain LMG 3246 initiation translation factor 2 (infB) gene, partial cds
• rRNA Operon Nucleotide:HG798906
  Citrobacter freundii partial 16S rRNA gene, strain LMG 3246
• Gene Nucleotide:HG798908
  Citrobacter freundii partial rpoB gene for RNA polymerase beta-subunit, strain LMG 3246
• Gene Nucleotide:JX425345
  Citrobacter freundii strain LMG 3246 RNA polymerase beta subunit (rpoB) gene, partial cds
• Gene Nucleotide:HG798911
  Citrobacter freundii partial fusA gene for Elongation factor G, strain LMG 3246
• Gene Nucleotide:AY123708
  Citrobacter freundii strain ATCC 8090 Cpn60 (cpn60) gene, partial cds
• Gene Nucleotide:AB003914
  Citrobacter freundii gene for CfparC, partial cds
• Gene Nucleotide:X14960
  Citrobacter fruendii htpR gene for sigma 32 transcription factor
• Gene Nucleotide:FJ345362
  Citrobacter freundii strain ATCC 8090 enterotoxin (stn) gene, partial cds
• Gene Nucleotide:X58820
  C.freundii livJ gene for leucine-isoleucine binding protein
• rRNA Operon Nucleotide:FM207096
  Citrobacter freundii partial 16S rRNA gene, strain ATCC 8090
• Gene Nucleotide:X59389
  C.freundii MglB gene for a galactose binding protein
• Gene Nucleotide:JX397948
  Citrobacter freundii ATCC 8090 elongation factor tu (tuf) gene, partial cds
• Gene Nucleotide:AF052253
  Citrobacter freundii DNA gyrase A (gyrA) gene, partial cds
• rRNA Operon Nucleotide:FJ971857
  Citrobacter freundii strain ATCC 8090 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:HM032027
  Citrobacter freundii strain ATCC 8090 glycerol dehydratase reactivation factor small subunit (dhaG), 1,3-propanediol dehydrogenase (dhaT), glycerol dehydratase 60 kDa subunit (dhaB), glycerol dehydratase 21 kDa subunit (dhaC), glycerol dehydratase 16 kDa subunit (dhaE), and glicerol dehydratase reactivation factor large subunit (dhaF) genes, complete cds; and unknown gene
• Gene Nucleotide:U14466
  Citrobacter freundii ATCC 8090 6-phosphogluconate dehydrogenase (gnd) gene, partial cds
• Gene Nucleotide:GU322411
  Citrobacter freundii strain ATCC 8090 AmpR transcriptional regulator (ampR) and beta-lactamase (ampC) genes, complete cds
• Gene Nucleotide:AJ300528
  Citrobacter freundii partial gyrB gene for DNA gyrase B subunit strain CIP 57.32T, ATCC 8090
• Gene Nucleotide:AB003913
  Citrobacter freundii gene for CfgyrA, partial cds
• Gene Nucleotide:AB734052
  Citrobacter freundii DNA, psp gene cluster, sap gene cluster, partial sequence, strain: ATCC 8090
• rRNA Operon Nucleotide:JX869173
  UNVERIFIED_ORG: Citrobacter freundii ATCC 8090 = MTCC 1658 23S ribosomal RNA gene, partial sequence
• Genome Assembly:GCA_011064845
  Citrobacter freundii ATCC 8090 = MTCC 1658 = NBRC 12681
• Genome Assembly:GCA_000759735
  Citrobacter freundii ATCC 8090 = MTCC 1658 = NBRC 12681
• Genome Assembly:GCA_000312465
  Citrobacter freundii ATCC 8090 = MTCC 1658 = NBRC 12681
• Genome Assembly:GCA_000734905
  Citrobacter freundii ATCC 8090 = MTCC 1658 = NBRC 12681
• Gene Nucleotide:FN297870
  Citrobacter freundii partial lacZ gene, strain CECT 401
• rRNA Operon Nucleotide:AJ233408
  Citrobacter freundii 16S rRNA gene (strain DSM 30039)
• Gene Nucleotide:AJ549510
  Citrobacter freundii partial 23S rRNA gene, type strain DSM 30039T
• rRNA Operon Nucleotide:MK847857
  Citrobacter freundii strain DSM 30039(T) 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:X66978
  C.freundii tpl gene for tyrosine phenol-lyase
• Genome Assembly:GCA_900635425
  Citrobacter freundii NCTC9750
• rRNA Operon Nucleotide:AB626119
  Citrobacter freundii gene for 16S rRNA, partial sequence, strain: JCM 1657
• Gene Nucleotide:EU010089
  Citrobacter freundii strain CIP 57.32 CTP synthetase (pyrG) gene, partial cds
• Gene Nucleotide:EU010062
  Citrobacter freundii strain CIP 57.32 leucine tRNA synthetase (leuS) gene, partial cds
• Gene Nucleotide:EU010116
  Citrobacter freundii strain CIP 57.32 RNA polymerase beta subunit (rpoB) gene, partial cds
• Gene Nucleotide:EU010035
  Citrobacter freundii strain CIP 57.32 elongation factor EF-G (fusA) gene, partial cds
• rRNA Operon Nucleotide:AB741688
  Citrobacter freundii gene for 16S ribosomal RNA, partial sequence, strain: NBRC 12681
• rRNA Operon Nucleotide:AB680314
  Citrobacter freundii gene for 16S rRNA, partial sequence, strain: NBRC 12681
• rRNA Operon Nucleotide:MN526966
  Citrobacter freundii strain NBRC 12681 16S ribosomal RNA gene, partial sequence.
• rRNA Operon Nucleotide:MN527267
  Citrobacter freundii strain NBRC 12681 16S ribosomal RNA gene, partial sequence.
• Gene Nucleotide:AB472801
  Citrobacter freundii tuf gene for elongation factor Tu, partial cds, strain: IAM 12471
• Gene Nucleotide:DQ859856
  Citrobacter freundii strain ICMP 7610 recombinase A (recA) gene, partial cds
• Gene Nucleotide:DQ859776
  Citrobacter freundii strain ICMP 7610 ATP synthase beta subunit (atpD) gene, partial cds
• Gene Nucleotide:DQ859849
  Citrobacter freundii strain ICMP 7610 carbamoylphosphate synthetase small subunit (carA) gene, partial cds

Associated Publications (10)

• DOI: 10.1128/jb.165.1.324-327.1986
  Hirato T, Ishiguro N, Shinagawa M, Sato G (1986). Conservation of DNA sequences for plasmid-mediated citrate utilization within the enterobacteria.
• DOI: 10.1016/j.micres.2014.12.007
  Przystalowska H, Zeyland J, Szymanowska-Powalowska D, Szalata M, Slomski R, Lipinski D (2014). 1,3-Propanediol production by new recombinant Escherichia coli containing genes from pathogenic bacteria.
• DOI: 10.1128/AAC.02396-12
  Saga T, Sabtcheva S, Mitsutake K, Ishii Y, Tateda K, Yamaguchi K, Kaku M (2013). Characterization of qnrB-like genes in Citrobacter species of the American Type Culture Collection.
• DOI: 10.1099/ijsem.0.002154
  Ribeiro TG, Goncalves BR, da Silva MS, Novais A, Machado E, Carrico JA, Peixe L (2017). Citrobacter portucalensis sp. nov., isolated from an aquatic sample.
• DOI: 10.1039/d1an00778e
  Awate DM, Pola CC, Shumaker E, Gomes CL, Juarez JJ (2021). 3D printed imaging platform for portable cell counting.
• DOI: 10.1007/s11274-021-03077-4
  Becerril-Varela K, Serment-Guerrero JH, Manzanares-Leal GL, Ramirez-Duran N, Guerrero-Barajas C (2021). Generation of electrical energy in a microbial fuel cell coupling acetate oxidation to Fe(3+) reduction and isolation of the involved bacteria.
• DOI: 10.1016/j.mimet.2022.106533
  Alfaro T, Elmore JR, Stromberg ZR, Hutchison JR, Hess BM (2022). Engineering Citrobacter freundii using CRISPR/Cas9 system.
• DOI: 10.1007/s00203-022-03253-6
  Gonzalez-Paz JR, Becerril-Varela K, Guerrero-Barajas C (2022). Iron reducing sludge as a source of electroactive bacteria: assessing iron reduction in biofilm bacteria, planktonic cells and isolates from a microbial fuel cell.
• DOI: 10.1099/ijsem.0.005720
  Furlan JPR, Ribeiro TG, Novais A, Cabral H, Peixe L, Stehling EG (2023). Citrobacter meridianamericanus sp. nov., isolated from a soil sample.
• DOI: 10.1271/bbb.56.1916
  Hisano T, Murata K, Kimura A, Matsushita K, Toyama H, Adachi O (1992). Characterization of membrane-bound spermidine dehydrogenase of Citrobacter freundii.

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID1750.3

Retrieved 5 months ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:29520

Local history

• Registered 11 months ago
• Last modified 5 months ago