Strain sc|0030008

StrainInfo: SI-ID 5058

Taxon

Vibrio harveyi (not Vibrio carchariae)

Sample

Brown shark , kidney (US)

Cultures (12)

LMG 7890 = ATCC 35084 = CCUG 19116 = CIP 104172 = NCIMB 12705 = IFO 15632 = CECT 4215 = CCRC 14141 = KCTC 2717 = NBRC 15632 = BCRC 14141 = DSM 23069

Other Designations (11)

1116b = VIB 286 = Grimes 1116b = Colwell 1116b = 116b = Grimes & Colwell 1116b = Verdonck VIB 286 = LMG 7890 QC 10/98 = HUFP 9110 = CAIM 330 = CAIM 517

Sequences (32)

• Gene Nucleotide:EF596516
  Vibrio harveyi strain LMG 7890 topoisomerase I (tpoA) gene, partial cds
• Gene Nucleotide:EF601233
  Vibrio harveyi strain LMG 7890 ATPase (atpA) gene, partial cds
• Gene Nucleotide:EF596160
  Vibrio harveyi strain LMG 7890 glyceraldehyde 3-phosphate dehydrogenase (gapA) gene, partial cds
• Gene Nucleotide:EF596443
  Vibrio harveyi strain LMG 7890 recombination-repair protein (recA) gene, partial cds
• Gene Nucleotide:AJ842628
  Vibrio harveyi partial rpoA gene for RNA polymerase alpha-subunit, strain LMG 7890
• Gene Nucleotide:EF596230
  Vibrio harveyi strain LMG 7890 DNA gyrase B subunit (gyrB) gene, partial cds
• Gene Nucleotide:AJ842441
  Vibrio harveyi partial recA gene, strain LMG 7890
• Gene Nucleotide:EF596300
  Vibrio harveyi strain LMG 7890 actin-like cytoskeleton protein (mreB) gene, partial cds
• Gene Nucleotide:EF596372
  Vibrio harveyi strain LMG 7890 urydilate kinase (pyrH) gene, partial cds
• Gene Nucleotide:EF596089
  Vibrio harveyi strain LMG 7890 cell division protein FtsZ (ftsZ) gene, partial cds
• rRNA Operon Nucleotide:AB255713
  Vibrio harveyi DNA, 16S-23S rRNA intergenic spacer and 23S rRNA, partial sequence, strain: ATCC 35084
• Gene Nucleotide:AF230934
  Vibrio harveyi strain ATCC35084 Hsp60 (hsp60) gene, partial cds
• Gene Nucleotide:JF930599
  Vibrio harveyi strain ATCC 35084 transmembrane regulatory protein (toxR) gene, partial cds
• rRNA Operon Nucleotide:D11243
  Vibrio carchariae 16S rRNA
• rRNA Operon Nucleotide:HM771342
  Vibrio harveyi 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:AB047589
  Vibrio carchariae rnpB, ORF1, ORF2 genes, partial cds
• Gene Nucleotide:JF930379
  Vibrio harveyi strain ATCC 35084 RNA polymerase s-70 factor (rpoD) gene, partial cds
• Gene Nucleotide:GQ149070
  Vibrio harveyi strain ATCC 35084 hemolysin (vhhB) gene, complete cds
• rRNA Operon Nucleotide:AF426814
  Vibrio harveyi VIB 286 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:JF723525
  Vibrio harveyi strain ATCC 35084 ATP synthase alpha subunit (atpA) gene, partial cds
• Gene Nucleotide:JF836277
  Vibrio harveyi strain ATCC 35084 RctB (rctB) gene, partial cds
• rRNA Operon Nucleotide:X02242
  Vibrio carchariae (ATCC 35084) 5S rRNA
• Gene Nucleotide:JQ015358
  Vibrio harveyi strain ATCC 35084 TopA (topA) gene, partial cds
• rRNA Operon Nucleotide:X74693
  V.carchiariae (ATCC 35084T) gene for 16S ribosomal RNA
• rRNA Operon Nucleotide:EU130475
  Vibrio harveyi ATCC:35084 16S ribosomal RNA gene, partial sequence
• rRNA Operon Nucleotide:GQ370528
  Vibrio harveyi strain ATCC 35084 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:JF930448
  Vibrio harveyi strain ATCC 35084 actin-like cytoskeleton protein (mreB) gene, partial cds
• Gene Nucleotide:JF836323
  Vibrio harveyi strain ATCC 35084 FtsZ (ftsZ) gene, partial cds
• Gene Nucleotide:AB050805
  Vibrio carchariae sodB gene for iron-cofactored superoxide dismutase, partial cds
• rRNA Operon Nucleotide:D11194
  Vibrio carchariae 16S rRNA
• Gene Nucleotide:FN423815
  Vibrio harveyi partial rpoB gene for RNA polymerase beta subunit, strain CCUG 19116
• rRNA Operon Nucleotide:AB680918
  Vibrio harveyi gene for 16S rRNA, partial sequence, strain: NBRC 15632

Associated Publications (6)

• DOI: 10.1007/BF02010940
  Grimes DJ, Maneval D, May EB, Hada H, Colwell RR, Jones RT, Stoskopf M, Hetrick FM, Stemmler J (1984). Vibrio species associated with mortality of sharks held in captivity
• DOI: 10.1099/00207713-44-3-416
  Ruimy R, Boussemart O, Christen R, Elbaze P, Lafay B, Gauthier M, Breittmayer V (1994). Phylogenetic Analysis and Assessment of the Genera Vibrio, Photobacterium, Aeromonas, and Plesiomonas Deduced from Small-Subunit rRNA Sequences
• DOI: 10.1099/00207713-35-1-119
  Vishniac HS (1985). Cryptococcus socialis sp. nov. and Cryptococcus consortionis sp. nov., Antarctic basidioblastomycetes.
• DOI: 10.1099/00207713-45-1-134
  Ishimaru K, Akagawa-matsushita M, Muroga K (1995). Vibrio penaeicida sp. nov., a Pathogen of Kuruma Prawns (Penaeus japonicus)
• DOI: 10.1111/J.1574-6941.2002.TB00934.X
  Robert-pillot A, Baron S, Lesne J, Fournier J, Quilici M (2002). Improved specific detection of Vibrio cholerae in environmental water samples by culture on selective medium and colony hybridization assay with an oligonucleotide probe
• DOI: 10.1099/00207713-48-3-749
  Pedersen K, Verdonck L, Jofre J, Koblavi S, Swings J, Grimont PAD, Vigneulle M, Austin DA, Tiainen T, Blanch AR, Larsen JL, Austin B (1998). Taxonomic evidence that Vibrio carchariae Grimes et al. 1985 is a junior synonym of Vibrio harveyi (Johnson and Shunk 1936) Baumann et al. 1981

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID5058.2

Retrieved 9 days ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:30008

Local history

• Registered 18 days ago
• Last modified 9 days ago