Strain sc|0031137

StrainInfo: SI-ID 311029 ^T

Taxon

Agrobacterium radiobacter

Sample

Ditch water

Cultures (25)

LMG 140 = ATCC 19358 = CCUG 3354 = DSM 30147 = IAM 12048 = ICMP 5785 = IFO 13532 = NCIB 9042 = NCPPB 3001 = PDDCC 5785 = CIP 104325 = NCIMB 9042 = LMD 27.5 = CECT 4112 = CCRC 10372 = CFBP 2414 = NCCB 27005 = NBRC 13532 = HAMBI 1814 = BCRC 10372 = KACC 10798 = CGMCC 1.2557 = CFBP 5522 = JCM 20371 = KCTC 22091

Other Designations (16)

EX 3.24.2 = ORS 1351 = Fred 64 = NZRCC 10201 = Delft E.X.3.24.2 = LMD Ex3-24-2 = Delft EX.3.24.2 = FIRDI 372 = L.624 = Delft-3-24-2 = DSMZ 30147 = CCTM La 3711 = E.X.3.24.2 = L 624 = Delft L624 = L.624 E.X.3.24.2

Sequences (44)

• Gene Nucleotide:AM418832
  Agrobacterium radiobacter partial gyrB gene for DNA gyrase subunit beta, strain LMG 140
• rRNA Operon Nucleotide:AF541973
  Agrobacterium tumefaciens strain LMG 140 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence and 23S ribosomal RNA gene, partial sequence
• Gene Nucleotide:AM181612
  Agrobacterium radiobacter partial gltA gene for citrate synthase, strain LMG 140
• Gene Nucleotide:JN580718
  Agrobacterium radiobacter strain LMG 140 glutamine synthetase II (glnII) gene, partial cds
• Gene Nucleotide:AM182935
  Agrobacterium radiobacter partial glnA gene for glutamine synthase, strain LMG 140
• Gene Nucleotide:AM295393
  Agrobacterium radiobacter partial rpoB gene for RNA polymerase beta subunit, strain LMG 140
• Gene Nucleotide:AM295443
  Agrobacterium radiobacter partial pnp gene for polyribonucleotide nucleotidyltransferase, strain LMG 140
• Gene Nucleotide:AM418785
  Agrobacterium radiobacter partial atpD gene for ATP synthase beta subunit, strain LMG 140
• Gene Nucleotide:FM213195
  Agrobacterium tumefaciens partial pal gene for peptidoglycan-associated lipoprotein, type strain LMG 140T
• rRNA Operon Nucleotide:AM181758
  Agrobacterium radiobacter partial 16S rRNA gene, strain LMG 140
• Gene Nucleotide:AM295438
  Agrobacterium radiobacter partial gap gene for glyceraldehyde 3-phosphate dehydrogenase, strain LMG 140
• Gene Nucleotide:FM213145
  Agrobacterium tumefaciens partial rpoD gene for RNA polymerase sigma factor, type strain LMG 140T
• Gene Nucleotide:AM181686
  Agrobacterium radiobacter partial thrC gene for threonine synthase, strain LMG 140
• Gene Nucleotide:FM213291
  Agrobacterium tumefaciens partial hrcA gene for heat-inducible transcription repressor, type strain LMG 140T
• Gene Nucleotide:AM418721
  Agrobacterium radiobacter partial 23S rRNA gene, strain LMG 140
• Gene Nucleotide:AM182077
  Agrobacterium radiobacter partial dnaK gene for molecular chaperone Hsp70, stain LMG 140
• Gene Nucleotide:FM213243
  Agrobacterium tumefaciens partial ribonuclease P RNA (rnpB gene), type strain LMG 140T
• Gene Nucleotide:AM182121
  Agrobacterium radiobacter partial recA gene for recombinase A, strain LMG 140
• Gene Nucleotide:FM164311
  Agrobacterium tumefaciens partial recA gene for recombinase A, genomovar G4, strain ATCC 19358, allele recA-G4-2
• Genome Assembly:GCA_002008215
  Agrobacterium radiobacter LMG 140
• Gene Nucleotide:KC293536
  Agrobacterium tumefaciens strain ATCC 19358 RNA polymerase subunit alpha (rpoA) gene, partial cds
• Gene Nucleotide:FR695144
  Agrobacterium tumefaciens partial glgC gene for glucose-1-phosphate adenylyltransferase, allele glgC-G4-4, genomovar G4, strain ATCC 19358
• Gene Nucleotide:FR695243
  Agrobacterium tumefaciens partial gyrB gene for DNA gyrase subunit B, allele gyrB-G4-2, genomovar G4, strain ATCC 19358
• Gene Nucleotide:EU007408
  Agrobacterium tumefaciens strain ATCC 19358 ChvA (chvA) gene, partial cds
• Gene Nucleotide:FR695094
  Agrobacterium tumefaciens partial ampC gene for beta-lactamase, allele ampC-G4-3, genomovar G4, strain ATCC 19358
• Gene Nucleotide:FR695194
  Agrobacterium tumefaciens partial gltD gene for glutamate synthase small subunit, allele gltD-G4-2, genomovar G4, strain ATCC 19358
• Gene Nucleotide:FR695293
  Agrobacterium tumefaciens partial mutS gene for methyl-directed mismatch repair protein, allele mutS-G4-4, genomovar G4, strain ATCC 19358
• rRNA Operon Nucleotide:AJ389904
  Agrobacterium radiobacter 16S rRNA gene, strain ATCC19358
• Genome Assembly:GCA_008801385
  Agrobacterium tumefaciens CCUG 3354
• Gene Nucleotide:GU559881
  Agrobacterium tumefaciens strain DSM 30147 ATP synthase beta subunit gene, partial cds
• Gene Nucleotide:GU559876
  Agrobacterium tumefaciens strain DSM 30147 recombinase A gene, partial cds
• Gene Nucleotide:AY572468
  Agrobacterium tumefaciens strain DSM 30147 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (cbbL) gene, partial cds
• Genome Assembly:GCA_963360635
  Agrobacterium radiobacter DSM 30147
• Genome Assembly:GCA_000421945
  Agrobacterium radiobacter DSM 30147
• rRNA Operon Nucleotide:AB247615
  Agrobacterium tumefaciens genes for 16S rRNA, tRNA-Ile, tRNA-Ala, 23S rRNA 150-b fragment, IVS, 23S rRNA 1.3-kb fragment A, partial and complete sequence, strain: IAM 12048
• rRNA Operon Nucleotide:OQ629322
  Agrobacterium tumefaciens strain IAM 12048 16S ribosomal RNA gene, partial sequence.
• Genome Assembly:GCA_011684005
  Agrobacterium radiobacter NCIB 9042
• Genome Assembly:GCA_001541305
  Agrobacterium radiobacter NCPPB 3001
• rRNA Operon Nucleotide:AB680423
  Agrobacterium tumefaciens gene for 16S rRNA, partial sequence, strain: NBRC 13532
• Gene Nucleotide:KF206649
  Agrobacterium tumefaciens strain HAMBI 1814 glutamine synthetase type I (glnA) gene, partial cds
• Gene Nucleotide:KF206734
  Agrobacterium tumefaciens strain HAMBI 1814 glutamine synthetase type II (glnII) gene, partial cds
• Gene Nucleotide:KF206563
  Agrobacterium tumefaciens strain HAMBI 1814 ATP synthase F1 beta subunit (atpD) gene, partial cds
• Gene Nucleotide:KF206906
  Agrobacterium tumefaciens strain HAMBI 1814 RNA polymerase beta subunit (rpoB) gene, partial cds
• Gene Nucleotide:KF206818
  Agrobacterium tumefaciens strain HAMBI 1814 recombinase A (recA) gene, partial cds

Associated Publications (5)

• DOI: 10.1099/00207713-51-1-89
  Young JM, Kuykendall LD, Kerr A, Martínez-romero E, Sawada H (2001). A revision of Rhizobium Frank 1889, with an emended description of the genus, and the inclusion of all species of Agrobacterium Conn 1942 and Allorhizobium undicola de Lajudie et al. 1998 as new combinations: Rhizobium radiobacter, R. rhizogenes, R. rubi, R. undicola and R. vitis.
• DOI: 10.1099/00207713-43-4-694
  Sawada H, Matsumoto S, Oyaizu H, Ieki H (1993). Proposal for rejection of Agrobacterium tumefaciens and revised descriptions for the genus Agrobacterium and for Agrobacterium radiobacter and Agrobacterium rhizogenes.
• DOI: 10.1002/BIT.260380109
  Dussap CG, Pons A, De Vita D (1991). Modeling growth and succinoglucan production by Agrobacterium radiobacter NCIB 9042 in batch cultures.
• DOI: 10.1099/00207713-30-1-225
  Skerman VBD, Mcgowan V, Sneath PHA (1980). Approved Lists of Bacterial Names
• DOI: 10.1099/IJS.0.64030-0
  Young JM, Pennycook SR, Watson DRW (2006). Proposal that Agrobacterium radiobacter has priority over Agrobacterium tumefaciens. Request for an Opinion

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID311029.2

Retrieved 6 days ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:31137

Local history

• Registered 17 days ago
• Last modified 6 days ago