Strain sc|0032098

StrainInfo: SI-ID 100967 ^T

Taxon

Stenotrophomonas rhizophila

Sample

Rape, rhizospere (DE)

Cultures (10)

ATCC BAA-473 = DSM 14405 = CCUG 47042 = LMG 22075 = CIP 107801 = KCTC 12169 = JCM 13333 = VTT E-072695 = LMG 24537 = CCUG 54934

Other Designations (10)

LMG22075Tt2 QC 10/03 = LMG22075Tt1 QC 10/03 = Coenye R-20372 = LMG 22075 1 = LMG 22075 2 = LMG24537T QC oorspr = e-p10 = P69 = R-20372 = Berg e-p10

Sequences (18)

• rRNA Operon Nucleotide:EU878279
  Stenotrophomonas rhizophila strain ATCC BAA-473 23S ribosomal RNA gene, partial sequence
• Gene Nucleotide:HM370195
  Stenotrophomonas rhizophila strain DSM 14405 DNA-formamidopyrimidine glycosylase (mutM) gene, partial cds
• Gene Nucleotide:HM370153
  Stenotrophomonas rhizophila strain DSM 14405 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (gapA) gene, partial cds
• Gene Nucleotide:HM370174
  Stenotrophomonas rhizophila strain DSM 14405 GMP synthase (guaA) gene, partial cds
• Gene Nucleotide:HM370258
  Stenotrophomonas rhizophila strain DSM 14405 pyruvate water dikinase (ppsA) gene, partial cds
• Gene Nucleotide:HM370216
  Stenotrophomonas rhizophila strain DSM 14405 NADH dehydrogenase (nuoD) gene, partial cds
• Gene Nucleotide:AM231148
  Stenotrophomonas rhizophila partial mco gene for laccase-like multicopper oxidase, strain DSM14405
• Gene Nucleotide:AJ878740
  Stenotrophomonas rhizophila ycaD gene for putative transporter and ggpPS gene for glucosylglycerol-phosphate phosphatase/synthase, strain DSM 14405
• Gene Nucleotide:HM370132
  Stenotrophomonas rhizophila strain DSM 14405 H(+)-transporting two-sector ATPase (atpD) gene, partial cds
• Gene Nucleotide:HM370237
  Stenotrophomonas rhizophila strain DSM 14405 RecA protein (recA) gene, partial cds
• Genome Assembly:GCA_000661955
  Stenotrophomonas rhizophila DSM 14405
• Gene Nucleotide:EU158914
  Stenotrophomonas rhizophila strain LMG 22075 AtpA (atpA) gene, partial cds
• Gene Nucleotide:EU159063
  Stenotrophomonas rhizophila strain LMG 22075 UvrB (uvrB) gene, partial cds
• Gene Nucleotide:EU159016
  Stenotrophomonas rhizophila strain LMG 22075 RpoA (rpoA) gene, partial cds
• Gene Nucleotide:EU158965
  Stenotrophomonas rhizophila strain LMG 22075 RecA-like (recA) gene, partial sequence
• Gene Nucleotide:GU968765
  Stenotrophomonas rhizophila strain CCUG 54934 RNA polymerase sigma factor (rpoD) gene, partial cds
• Gene Nucleotide:GU945512
  Stenotrophomonas rhizophila strain CCUG 54934 gyrase subunit B (gyrB) gene, partial cds
• Gene Nucleotide:GU945526
  Stenotrophomonas rhizophila strain CCUG 54934 gyrase subunit B (gyrB) gene, partial cds

Associated Publications (5)

• DOI: 10.1099/00207713-52-6-1937
  Wolf A, Fritze A, Hagemann M, Berg G (2002). Stenotrophomonas rhizophila sp. nov., a novel plant-associated bacterium with antifungal properties.
• DOI: 10.3389/fpls.2013.00141
  Alavi P, Starcher MR, Zachow C, Muller H, Berg G (2013). Root-microbe systems: the effect and mode of interaction of Stress Protecting Agent (SPA) Stenotrophomonas rhizophila DSM14405(T.).
• DOI: 10.1016/j.scitotenv.2022.155403
  Liu Y, Gao J, Wang N, Li X, Fang N, Zhuang X (2022). Diffusible signal factor enhances the saline-alkaline resistance and rhizosphere colonization of Stenotrophomonas rhizophila by coordinating optimal metabolism.
• DOI: 10.3389/fmicb.2023.1155081
  Zhuang X, Liu Y, Fang N, Bai Z, Gao J (2023). Quorum sensing improves the plant growth-promoting ability of Stenotrophomonas rhizophila under saline-alkaline stress by enhancing its environmental adaptability.
• DOI: 10.1007/s00203-021-02586-y
  Wei X, Lei S, Deng Y, Zhang Y, Zhang L, Niu Q (2021). Stenotrophomonas nematodicola sp. nov., isolated from Caenorhabditis elegans.

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID100967.3

Retrieved 5 months ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:32098

Local history

• Registered 11 months ago
• Last modified 5 months ago