Strain sc|0032494

StrainInfo: SI-ID 34648 ^T

Taxon

Mycobacterium marinum

Sample

Animal,Actinopterygii,Water (US)

Cultures (18)

CT1961-00140 = ATCC 927 = CCUG 20998 = NCTC 2275 = CCUG 27843 = CIP 104528 = DSM 43225 = DSM 44344 = NCIMB 1297 = NCMB 1303 = NCMB1476 = CECT 3024 = NCIMB 1303 = NCIMB 1476 = JCM 12275 = CECT 7091 = CNCTC 7279 = JCM 17638

Other Designations (17)

2275 = ITM 500001 = L0074 = M000140 = IFM 10630 = Vincent 14 012 0001 = CNCTC My 236/80 = CCTM La 2404 = KPM 1201 = Borstel SN 1251 = GA 411 = Ridell MS425 = TMC 1218 = Aronson = MS425 = MS 425 = 140120001

Sequences (42)

• Gene Nucleotide:AY601692
  Mycobacterium marinum strain ATCC 927 RecA (recA) gene, partial cds
• Gene Nucleotide:AB548715
  Mycobacterium marinum hsp65 gene for heat shock protein 65, partial cds, strain: ATCC 927
• Gene Nucleotide:AY724719
  Mycobacterium marinum strain ATCC 927 preprotein translocase SecA1 (secA1) gene, partial cds
• rRNA Operon Nucleotide:AB636134
  Mycobacterium marinum gene for 16S ribosomal RNA, partial sequence
• Gene Nucleotide:AF057476
  Mycobacterium marinum RNA polymerase beta (rpoB) gene, partial cds
• Gene Nucleotide:FJ685517
  Mycobacterium marinum AroE (aroE) gene, aroE-13 allele, partial cds
• rRNA Operon Nucleotide:AB548718
  Mycobacterium marinum DNA, 16S-23S ribosomal RNA intergenic spacer, partial sequence, strain: ATCC 927
• rRNA Operon Nucleotide:AB548717
  Mycobacterium marinum gene for 16S ribosomal RNA, partial sequence, strain: ATCC 927
• Gene Nucleotide:AY225215
  Mycobacterium marinum antigen 85A (fbpA) gene, complete cds
• Gene Nucleotide:DQ792981
  Mycobacterium marinum PmiA (pmiA) and hydrolase genes, complete cds; and carboxylase gene, partial cds
• Gene Nucleotide:AB548716
  Mycobacterium marinum rpoB gene for RNA polymerase, partial cds, strain: ATCC 927
• Gene Nucleotide:FJ685521
  Mycobacterium marinum SodA (sodA) gene, sodA-10 allele, partial cds
• Gene Nucleotide:AF456470
  Mycobacterium marinum strain ATCC 927 heat shock protein 65 (hsp65) gene, partial cds
• rRNA Operon Nucleotide:AF456240
  Mycobacterium marinum strain ATCC 927 16S ribosomal RNA gene, partial sequence
• rRNA Operon Nucleotide:U24532
  Mycobacterium marinum 23S rRNA, partial sequence
• Gene Nucleotide:AY299134
  Mycobacterium marinum strain ATCC 927 heat shock protein 65 (hsp65) gene, partial cds
• Gene Nucleotide:Y16289
  Mycobacterium marinum gyrA gene, partial
• Gene Nucleotide:AB087696
  Mycobacterium marinum dnaA gene for DnaA, partial cds
• Gene Nucleotide:AF253449
  Mycobacterium marinum alpha-crystallin protein (acr) gene, partial cds
• rRNA Operon Nucleotide:AJ315572
  Mycobacterium marinum internal transcribed spacer 1 (ITS1), strain ATCC927
• rRNA Operon Nucleotide:U92088
  Mycobacterium marinum ATCC 927, 16S ribosomal RNA gene, partial sequence
• Genome Assembly:GCA_003609695
  Mycobacterium marinum ATCC 927
• Genome Assembly:GCA_003391395
  Mycobacterium marinum CCUG20998
• Gene Nucleotide:AF271348
  Mycobacterium marinum polyphosphate kinase (ppk) gene, partial cds
• Gene Nucleotide:AF271342
  Mycobacterium marinum putative adenylate kinase (adk) gene, partial cds
• Gene Nucleotide:AF271349
  Mycobacterium marinum superoxide dismutase (sod) gene, partial cds
• Gene Nucleotide:AF271346
  Mycobacterium marinum putative GroEl (groEL) gene, partial cds
• rRNA Operon Nucleotide:AF271347
  Mycobacterium marinum 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:AF271343
  Mycobacterium marinum putative shikimate dehydrogenase (aroE) gene, partial cds
• Gene Nucleotide:AF271344
  Mycobacterium marinum putative phytoene synthase (crtB) gene, partial cds
• Gene Nucleotide:AF271345
  Mycobacterium marinum putative FbpA (fbpA) gene, partial cds
• Genome Assembly:GCA_003431655
  Mycobacterium marinum NCTC2275
• rRNA Operon Nucleotide:AF547946
  Mycobacterium marinum strain CIP 104528 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:DQ986013
  Mycobacterium marinum strain CIP 104528 elongation factor Tu (tuf) gene, partial cds
• Gene Nucleotide:DQ480262
  Mycobacterium marinum strain CIP 104528 tmRNA (ssrA) gene, partial sequence
• Gene Nucleotide:AY544845
  Mycobacterium marinum strain CIP 104528 superoxide dismutase (sod) gene, partial cds
• Gene Nucleotide:AF547855
  Mycobacterium marinum strain CIP 104528 65 kDa heat shock protein (hsp65) gene, partial cds
• Gene Nucleotide:AY544943
  Mycobacterium marinum strain CIP 104528 RNA polymerase (rpoB) gene, partial cds
• rRNA Operon Nucleotide:AJ536032
  Mycobacterium marinum 16S rRNA gene
• Genome Assembly:GCA_003431645
  Mycobacterium marinum DSM 44344
• rRNA Operon Nucleotide:AM396452
  Mycobacterium marinum ITS1, isolate NCIMB1297
• rRNA Operon Nucleotide:AM884312
  Mycobacterium marinum partial 16S rRNA gene, strain NCIMB 1297

Associated Publications (8)

• Batra PP, Takeda K, Kreye W (1989). Studies on adenylate kinase (ATP:AMP phosphotransferase) of Mycobacterium marinum (ATCC 927).
• DOI: 10.1016/0167-4838(86)90075-0
  Batra PP, Burnette B, Takeda K (1986). Purification and characterization of ATP:AMP phosphotransferase from Mycobacterium marinum.
• DOI: 10.1128/AEM.68.11.5281-5287.2002
  Ucko M, Colorni A, Kvitt H, Diamant A, Zlotkin A, Knibb WR (2002). Strain variation in Mycobacterium marinum fish isolates.
• DOI: 10.3354/dao01891
  Ostland VE, Watral V, Whipps CM, Austin FW, St-Hilaire S, Westerman ME, Kent ML (2008). Biochemical, molecular, and virulence characteristics of select Mycobacterium marinum isolates in hybrid striped bass Morone chrysops x M. saxatilis and zebrafish Danio rerio.
• DOI: 10.1111/j.1365-2761.2009.01074.x
  Ramsay JM, Watral V, Schreck CB, Kent ML (2009). Husbandry stress exacerbates mycobacterial infections in adult zebrafish, Danio rerio (Hamilton).
• DOI: 10.1128/genomeA.00397-18
  Yoshida M, Fukano H, Miyamoto Y, Shibayama K, Suzuki M, Hoshino Y (2018). Complete Genome Sequence of Mycobacterium marinum ATCC 927(T), Obtained Using Nanopore and Illumina Sequencing Technologies.
• DOI: 10.1128/mSystems.00500-21
  Savijoki K, Myllymaki H, Luukinen H, Paulamaki L, Vanha-Aho LM, Svorjova A, Miettinen I, Fallarero A, Ihalainen TO, Yli-Kauhaluoma J, Nyman TA, Parikka M (2021). Surface-Shaving Proteomics of Mycobacterium marinum Identifies Biofilm Subtype-Specific Changes Affecting Virulence, Tolerance, and Persistence.
• DOI: 10.1128/mra.01016-23
  Savijoki K, Deptula P, Roberts RJ, Hammaren M, Yli-Kauhaluoma J, Varmanen P, Parikka M (2024). Revised whole genome and DNA methylome of Mycobacterium marinum type strain ATCC 927(T).

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID34648.3

Retrieved 5 months ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:32494

Local history

• Registered 11 months ago
• Last modified 5 months ago