Strain sc|0035381

StrainInfo: SI-ID 12996 ^T

Taxon

Vibrio tapetis

Sample

Cultured clam (FR)

Cultures (7)

LMG 19159 = ATCC 700075 = CECT 4600 = CIP 104856 = LMG 19706 = NCIMB 13622 = DSM 21475

Other Designations (4)

CAIM 603 = ATCC 70075 = B1090 = Borrego B1090

Sequences (20)

• Gene Nucleotide:HE795189
  Vibrio tapetis partial pyrH gene for uridylate kinase, type strain CECT 4600T
• Gene Nucleotide:AY823540
  Vibrio tapetis strain CECT 4600 RNA polymerase beta subunit (rpoB) gene, partial cds
• Gene Nucleotide:HE795279
  Vibrio tapetis partial rpoD gene for RNA polymerase sigma factor, type strain CECT 4600T
• Gene Nucleotide:HE795159
  Vibrio tapetis atpA gene for ATPase subunit alpha, type strain CECT 4600T
• rRNA Operon Nucleotide:Y08430
  V.tapetis 16S rRNA gene
• Gene Nucleotide:AM162571
  Vibrio tapetis partial gyrB gene for gyrase B protein, strain CECT 4600
• Gene Nucleotide:AM162561
  Vibrio tapetis partial hsp60 gene for heat shock protein 60, strain CECT 4600
• Gene Nucleotide:HE795369
  Vibrio tapetis partial gapA gene for glyceraldehyde-3-phosphodehydrogenase, type strain CECT 4600T
• Gene Nucleotide:HE795317
  Vibrio tapetis partial fstZ gene for cell division protein, type strain CECT 4600T
• Gene Nucleotide:HE795340
  Vibrio tapetis partial rpoA gene for RNA polymerase alpha subunit, type strain CECT 4600T
• Gene Nucleotide:HF545989
  Vibrio sp. CECT 4600 partial pyrH gene for uridylate kinase, strain CECT 4600
• rRNA Operon Nucleotide:HE795129
  Vibrio tapetis 16S rRNA gene, type strain CECT 4600T
• Gene Nucleotide:HE795219
  Vibrio tapetis partial recA gene for recombinase A, type strain CECT 4600T
• Gene Nucleotide:HF542104
  Vibrio tapetis partial rpoD gene for sigma factor RNA polymerase, strain CECT 4600
• Gene Nucleotide:HE795249
  Vibrio tapetis partial topA gene for DNA topoisomerase I, type strain CECT 4600T
• Genome Assembly:GCA_900233005
  Vibrio tapetis subsp. tapetis Vibrio tapetis CECT4600
• Gene Nucleotide:AJ842730
  Vibrio tapetis partial rpoA gene for RNA polymerase alpha-subunit, strain LMG 19706T
• Gene Nucleotide:AB298249
  Vibrio tapetis gyrB gene for gyrase B subunit, partial cds
• rRNA Operon Nucleotide:AB255734
  Vibrio tapetis DNA, 16S-23S rRNA intergenic spacer and 23S rRNA, partial sequence, strain: NCIMB 13622.
• rRNA Operon Nucleotide:AB255735
  Vibrio tapetis DNA, 16S-23S rRNA intergenic spacer type 1 and 23S rRNA, partial sequence, strain: NCIMB 13622.

Associated Publications (10)

• DOI: 10.1371/journal.pone.0016759
  Erauso G, Lakhal F, Bidault-Toffin A, Le Chevalier P, Bouloc P, Paillard C, Jacq A (2011). Evidence for the role of horizontal transfer in generating pVT1, a large mosaic conjugative plasmid from the clam pathogen, Vibrio tapetis.
• DOI: 10.3354/dao01950
  Paillard C, Korsnes K, Le Chevalier P, Le Boulay C, Harkestad L, Eriksen AG, Willassen E, Bergh O, Bovo C, Skar C, Mortensen S (2008). Vibrio tapetis-like strain isolated from introduced Manila clams Ruditapes philippinarum showing symptoms of brown ring disease in Norway.
• DOI: 10.1111/j.1574-6968.2011.02393.x
  Balboa S, Bermudez-Crespo J, Gianzo C, Lopez JL, Romalde JL (2011). Proteomics and multilocus sequence analysis confirm intraspecific variability of Vibrio tapetis.
• DOI: 10.1111/j.1365-2672.2012.05271.x
  Bermudez-Crespo J, Balboa S, Alonso J, Romalde JL (2012). Two-dimensional proteome reference map of Vibrio tapetis, the aetiological agent of brown ring disease in clams.
• DOI: 10.1007/s12602-014-9173-3
  Rodrigues S, Paillard C, Dufour A, Bazire A (2015). Antibiofilm Activity of the Marine Bacterium Pseudoalteromonas sp. 3J6 Against Vibrio tapetis, the Causative Agent of Brown Ring Disease.
• DOI: 10.1016/j.fsi.2014.10.021
  Le Bris C, Richard G, Paillard C, Lambert C, Seguineau C, Gauthier O, Pernet F, Guerard F (2014). Immune responses of phenoloxidase and superoxide dismutase in the manila clam Venerupis philippinarum challenged with Vibrio tapetis--Part I: Spatio-temporal evolution of enzymes' activities post-infection.
• DOI: 10.1016/j.fsi.2014.12.039
  Richard G, Le Bris C, Guerard F, Lambert C, Paillard C (2015). Immune responses of phenoloxidase and superoxide dismutase in the manila clam Venerupis philippinarum challenged with Vibrio tapetis--part II: combined effect of temperature and two V. tapetis strains.
• DOI: 10.7717/peerj.1484
  Bidault A, Richard GG, Le Bris C, Paillard C (2015). Development of a Taqman real-time PCR assay for rapid detection and quantification of Vibrio tapetis in extrapallial fluids of clams.
• DOI: 10.3389/fmicb.2018.00227
  Dias GM, Bidault A, Le Chevalier P, Choquet G, Der Sarkissian C, Orlando L, Medigue C, Barbe V, Mangenot S, Thompson CC, Thompson FL, Jacq A, Pichereau V, Paillard C (2018). Vibrio tapetis Displays an Original Type IV Secretion System in Strains Pathogenic for Bivalve Molluscs.
• DOI: 10.1111/jam.14699
  Rahmani A, Mathien C, Bidault A, Le Goic N, Paillard C, Pichereau V (2020). External pH modulation during the growth of Vibrio tapetis, the aetiological agent of brown ring disease.

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID12996.3

Retrieved 5 months ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:35381

Local history

• Registered 11 months ago
• Last modified 5 months ago